RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TRAPPC12Q8WVT3 735 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 LZTS2Q9BRK4 669 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 CADM1Q9BY67 442 aaKnown RBP7.25□□□□□ -1.25
CSDE1-213ENST00000530784 LY9Q9HBG7 655 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 PLAC1Q9HBJ0 212 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 KRCC1Q9NPI7 259 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-213ENST00000530784 TUBE1Q9UJT0 475 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 ZNF580Q9UK33 172 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 RAP2CQ9Y3L5 183 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 ADGRA3Q8IWK6 1321 aa7.25□□□□□ -1.25
CSDE1-213ENST00000530784 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CCDC69A6NI79 296 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 STMND1H3BQB6 276 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 MEIS2O14770 477 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 PLEKHA8P1O95397 391 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CHRNA1P02708 482 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CALM1P0DP23 149 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CALM2P0DP24 149 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CALM3P0DP25 149 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CHRNB2P17787 502 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 MARK3P27448 753 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CCKBRP32239 447 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 PNPLA4P41247 253 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 GPR18Q14330 331 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 ZNF484Q5JVG2 852 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 TMEM71Q6P5X7 295 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 RPAINQ86UA6 219 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 SEPT1Q8WYJ6 367 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 PABPC5Q96DU9 382 aaKnown RBP7.24□□□□□ -1.25
CSDE1-213ENST00000530784 THOC3Q96J01 351 aaKnown RBP7.24□□□□□ -1.25
CSDE1-213ENST00000530784 ZNF479Q96JC4 524 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 FRG2BQ96QU4 278 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 ZPBPQ9BS86 351 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 SF3B5Q9BWJ5 86 aaKnown RBP7.24□□□□□ -1.25
CSDE1-213ENST00000530784 TWSG1Q9GZX9 223 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 PSTPIP2Q9H939 334 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 CHODLQ9H9P2 273 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 ERAP1Q9NZ08 941 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 NCKIPSDQ9NZQ3 722 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 UPB1Q9UBR1 384 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 PCDHA7Q9UN72 937 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 TET1Q8NFU7 2136 aa7.24□□□□□ -1.25
CSDE1-213ENST00000530784 MYH6P13533 1939 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 PRRC2BQ5JSZ5 2229 aaKnown RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 TCF20Q9UGU0 1960 aaKnown RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 MBLAC1A4D2B0 266 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 TMEM247A6NEH6 219 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 C5orf67F2Z3F1 127 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 SH2B2O14492 632 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 CCNT1O60563 726 aaKnown RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 ATP9AO75110 1047 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 TMCC1O94876 653 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 RB1P06400 928 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 UNGP13051 313 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 CPA1P15085 419 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 ARSBP15848 533 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 RXRAP19793 462 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 PRKCHP24723 683 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 MGAT3Q09327 533 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 THOC5Q13769 683 aaKnown RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 BTG3Q14201 252 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 LPIN1Q14693 890 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 UBE2SQ16763 222 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 RUNDC3AQ59EK9 446 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 FBXO47Q5MNV8 452 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 UBAP2Q5T6F2 1119 aaKnown RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 DCAF12L2Q5VW00 463 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 TMTC2Q8N394 836 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 SRBD1Q8N5C6 995 aaKnown RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 HORMAD2Q8N7B1 307 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 FAR1Q8WVX9 515 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 DNAJB3Q8WWF6 145 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 THAP4Q8WY91 577 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 IFT27Q9BW83 186 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 FAM49AQ9H0Q0 323 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-213ENST00000530784 LMAN2LQ9H0V9 348 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 SMARCAD1Q9H4L7 1026 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 KIF17Q9P2E2 1029 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 CDH22Q9UJ99 828 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 UBIAD1Q9Y5Z9 338 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 BDP1A6H8Y1 2624 aa7.23□□□□□ -1.25
CSDE1-213ENST00000530784 MICAL3Q7RTP6 2002 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 EVPLQ92817 2033 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 A0A1B0GVT2 93 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 GSTTP1A0A1W2PQM5 241 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 RRN3P2A6NIE6 340 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 C17orf100A8MU93 164 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 I6L893 689 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-213ENST00000530784 M0QZ92 97 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 DCXO43602 365 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 CSPG5O95196 566 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 DDAH2O95865 285 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 LCATP04180 440 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 LINC00271P0C7V0 271 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 HOXB6P17509 224 aaKnown RBP7.22□□□□□ -1.25
CSDE1-213ENST00000530784 LIFRP42702 1097 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 AARSP49588 968 aaKnown RBP eCLIP7.22□□□□□ -1.25
CSDE1-213ENST00000530784 MCM2P49736 904 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 MVDP53602 400 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 MRPS6P82932 125 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms