RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 RRAGCQ9HB90 399 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 GDAP2Q9NXN4 497 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 MORF4L1Q9UBU8 362 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 PCDHGA3Q9Y5H0 932 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 COL4A5P29400 1685 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 IDH3BO43837 385 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 CABYRO75952 493 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 MBL2P11226 248 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 RPS3AP61247 264 aaKnown RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 CHRNB3Q05901 458 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 TRAP1Q12931 704 aaKnown RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 SLC13A2Q13183 592 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 VPS26BQ4G0F5 336 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 LINGO4Q6UY18 593 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 RALGPS2Q86X27 583 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 SH3YL1Q96HL8 342 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 CGREF1Q99674 301 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 ASPSCR1Q9BZE9 553 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 GIMAP4Q9NUV9 329 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 FZD9O00144 591 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 MTHFD1P11586 935 aaKnown RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 PTPN3P26045 913 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 TMBIM6P55061 237 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 OXA1LQ15070 435 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 CCL14Q16627 93 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 PPP1R3AQ16821 1122 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 TIGD7Q6NT04 549 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 IL27RAQ6UWB1 636 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 TANKQ92844 425 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 LHPPQ9H008 270 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 SCUBE2Q9NQ36 999 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 A0A1W2PQ67 120 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MGEA5O60502 916 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 VAC14Q08AM6 782 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 NAB1Q13506 487 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MAMDC4Q6UXC1 1216 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 ANKRD13BQ86YJ7 626 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MAGED4Q96JG8 741 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 ZFYVE19Q96K21 471 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 CLPBQ9H078 707 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 EPS8L2Q9H6S3 715 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SPASTQ9UBP0 616 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SLC2A6Q9UGQ3 507 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 TRAF6Q9Y4K3 522 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SLC22A2O15244 555 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 GCATO75600 419 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 GABBR2O75899 941 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 NCK1P16333 377 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SLC11A2P49281 568 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 KRT33BQ14525 404 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SQLEQ14534 574 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 PPP2R2DQ66LE6 453 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 CNSTQ6PJW8 725 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 TAC4Q86UU9 113 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SPNS2Q8IVW8 549 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 CLIP3Q96DZ5 547 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MEIS3P2A8K0S8 358 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 FAM72CH0Y354 149 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 AXIN1O15169 862 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SIX3O95343 332 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MMP3P08254 477 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 IL7RP16871 459 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 YWHAQP27348 245 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MZF1P28698 734 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 COL9A2Q14055 689 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 FAM72AQ5TYM5 149 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 FAM72DQ6L9T8 149 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 ZYG11AQ6WRX3 759 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 DDX53Q86TM3 631 aaKnown RBP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 FAM72BQ86X60 149 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MUS81Q96NY9 551 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 MROQ9BYG7 248 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 NANOGQ9H9S0 305 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 IQCF5A8MTL0 148 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 BMP2P12643 396 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 ATP5F1P24539 256 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 TAZQ16635 292 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 SMUG1Q53HV7 270 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 PLD3Q8IV08 490 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 EFHD2Q96C19 240 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-210ENST00000528516 PPM1MQ96MI6 270 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 ZNF112Q9UJU3 913 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 CNTN6Q9UQ52 1028 aa17.79■□□□□ 0.44
LTBP3-210ENST00000528516 ANKRD34BA5PLL1 514 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 LRRC37AA6NMS7 1700 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 SEC24AO95486 1093 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 LTA4HP09960 611 aaKnown RBP17.78■□□□□ 0.44
LTBP3-210ENST00000528516 ICAM3P32942 547 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 RGS4P49798 205 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 HSPA14Q0VDF9 509 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 SPCS2Q15005 226 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 DET1Q7L5Y6 550 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 LRRC52Q8N7C0 313 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 ZFP90Q8TF47 636 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 CEP19Q96LK0 163 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 MIR1-1HGQ9H1L0 117 aa17.78■□□□□ 0.44
LTBP3-210ENST00000528516 TP63Q9H3D4 680 aaPredicted RBP17.78■□□□□ 0.44
LTBP3-210ENST00000528516 TAS2R13Q9NYV9 303 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms