RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SPATA6LQ8N4H0 392 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 TMEM116Q8NCL8 245 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 CREB3L4Q8TEY5 395 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 RTP4Q96DX8 246 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 MTBPQ96DY7 904 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 PRAM1Q96QH2 718 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 SH3GL2Q99962 352 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 KXD1Q9BQD3 176 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 TMEM47Q9BQJ4 181 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 HAUS8Q9BT25 410 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 IL25Q9H293 177 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 NDST4Q9H3R1 872 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 C17orf75Q9HAS0 396 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 FBRSL1Q9HCM7 1045 aaKnown RBP5.94□□□□□ -1.46
CPNE3-206ENST00000523469 HINT3Q9NQE9 182 aaKnown RBP5.94□□□□□ -1.46
CPNE3-206ENST00000523469 CNGB3Q9NQW8 809 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 DLGAP2Q9P1A6 1054 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 USP54Q70EL1 1684 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 SBF1O95248 1867 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 DOT1LQ8TEK3 1739 aa5.94□□□□□ -1.46
CPNE3-206ENST00000523469 FAM237AA0A1B0GTK4 181 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 SH3BP5O60239 455 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 WDHD1O75717 1129 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-206ENST00000523469 CYC1P08574 325 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 G6PDP11413 515 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 KRT10P13645 584 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 ZNF182P17025 639 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-206ENST00000523469 EIF2S3P41091 472 aaKnown RBP5.93□□□□□ -1.46
CPNE3-206ENST00000523469 GOLGA8DPQ0D2H9 430 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 CSTF3Q12996 717 aaKnown RBP5.93□□□□□ -1.46
CPNE3-206ENST00000523469 MYBPHQ13203 477 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 NFATC4Q14934 902 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 SLC45A4Q5BKX6 768 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 GGNBP1Q5YKI7 109 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 HIST2H2BCQ6DN03 193 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 HIST2H2BDQ6DRA6 164 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 KIAA1161Q6NSJ0 714 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 TAOK1Q7L7X3 1001 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 ZNF114Q8NC26 417 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 MMABQ96EY8 250 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-206ENST00000523469 PERPQ96FX8 193 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 TMEM68Q96MH6 324 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 OR1F2PQ96R84 312 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 DIAPH3Q9NSV4 1193 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 KCNE2Q9Y6J6 123 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 PIAS3Q9Y6X2 628 aa5.93□□□□□ -1.46
CPNE3-206ENST00000523469 BRCA1P38398 1863 aaKnown RBP5.93□□□□□ -1.46
CPNE3-206ENST00000523469 TAF1LQ8IZX4 1826 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 KIF13BQ9NQT8 1826 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 TNRC18O15417 2968 aaPredicted RBP5.92□□□□□ -1.46
CPNE3-206ENST00000523469 CCDC88AQ3V6T2 1871 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 C4orf47A7E2U8 309 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 AKR1B15C9JRZ8 316 aaPredicted RBP5.92□□□□□ -1.46
CPNE3-206ENST00000523469 GTPBP1O00178 669 aaKnown RBP5.92□□□□□ -1.46
CPNE3-206ENST00000523469 DAOP14920 347 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 SSTR2P30874 369 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 PBX3P40426 434 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 PDLIM4P50479 330 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 ART1P52961 327 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 DDR1Q08345 913 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 KRT32Q14532 448 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 ASIC2Q16515 512 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 CALCRLQ16602 461 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 CXorf66Q5JRM2 361 aaPredicted RBP5.92□□□□□ -1.46
CPNE3-206ENST00000523469 HAUS3Q68CZ6 603 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 ZNF324BQ6AW86 544 aaPredicted RBP5.92□□□□□ -1.46
CPNE3-206ENST00000523469 FAM180BQ6P0A1 224 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 RBM23Q86U06 439 aaKnown RBP5.92□□□□□ -1.46
CPNE3-206ENST00000523469 ADSSL1Q8N142 457 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 SKA1Q96BD8 255 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 SCMH1Q96GD3 660 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 C1QTNF5Q9BXJ0 243 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 KCNN2Q9H2S1 579 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 C6orf106Q9H6K1 298 aaPredicted RBP5.92□□□□□ -1.46
CPNE3-206ENST00000523469 PPP1R3EQ9H7J1 279 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 SNX9Q9Y5X1 595 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 PSAT1Q9Y617 370 aa5.92□□□□□ -1.46
CPNE3-206ENST00000523469 QRICH2Q9H0J4 1663 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 PIK3C2GO75747 1445 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 TIAM2Q8IVF5 1701 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 KIAA1551Q9HCM1 1747 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 A0A1W2PQF6 199 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 ACOT8O14734 319 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 PLRG1O43660 514 aaKnown RBP5.91□□□□□ -1.46
CPNE3-206ENST00000523469 IPO7O95373 1038 aaKnown RBP5.91□□□□□ -1.46
CPNE3-206ENST00000523469 DDX58O95786 925 aaKnown RBP5.91□□□□□ -1.46
CPNE3-206ENST00000523469 FTCDO95954 541 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 FGF3P11487 239 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-206ENST00000523469 SRCP12931 536 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 ITGB6P18564 788 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 F2RL1P55085 397 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 EIF2S3LQ2VIR3 472 aaKnown RBP5.91□□□□□ -1.46
CPNE3-206ENST00000523469 ATP13A5Q4VNC0 1218 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 RHBDF2Q6PJF5 856 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 CYP20A1Q6UW02 462 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 PQLC2Q6ZP29 291 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 PXKQ7Z7A4 578 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 FRMD1Q8N878 549 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 WFIKKN2Q8TEU8 576 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms