RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ATCAYQ86WG3 371 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 TEX19Q8NA77 164 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 C9orf72Q96LT7 481 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 LYSMD1Q96S90 227 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 TDRD1Q9BXT4 1180 aaKnown RBP22.47■■□□□ 1.19
PVT1-218ENST00000523328 HAUS4Q9H6D7 363 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 PCDH18Q9HCL0 1135 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 CROTQ9UKG9 612 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 CHKBQ9Y259 395 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 OR5K4A6NMS3 321 aa22.46■■□□□ 1.19
PVT1-218ENST00000523328 DSC2Q02487 901 aa22.46■■□□□ 1.19
PVT1-218ENST00000523328 ERV3-1Q14264 604 aa22.46■■□□□ 1.19
PVT1-218ENST00000523328 C6orf15Q6UXA7 325 aaPredicted RBP22.46■■□□□ 1.19
PVT1-218ENST00000523328 LRRC49Q8IUZ0 686 aa22.46■■□□□ 1.19
PVT1-218ENST00000523328 CCDC13Q8IYE1 715 aa22.46■■□□□ 1.19
PVT1-218ENST00000523328 LRRC4CQ9HCJ2 640 aa22.46■■□□□ 1.19
PVT1-218ENST00000523328 PRDM8Q9NQV8 689 aa22.46■■□□□ 1.19
PVT1-218ENST00000523328 TNRC6AQ8NDV7 1962 aaKnown RBP22.45■■□□□ 1.18
PVT1-218ENST00000523328 LRRC53A6NM62 1247 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 DDX3XO00571 662 aaKnown RBP eCLIP22.45■■□□□ 1.18
PVT1-218ENST00000523328 NUAK1O60285 661 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 KRT7P08729 469 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 CDK11BP21127 795 aaKnown RBP22.45■■□□□ 1.18
PVT1-218ENST00000523328 SPINT3P49223 89 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 CLCNKAP51800 687 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 E4F1Q66K89 784 aaPredicted RBP22.45■■□□□ 1.18
PVT1-218ENST00000523328 ASB18Q6ZVZ8 466 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.45■■□□□ 1.18
PVT1-218ENST00000523328 AVL9Q8NBF6 648 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 GALNT6Q8NCL4 622 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 TEKT4Q8WW24 435 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 MAML1Q92585 1016 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 PLEKHG4BQ96PX9 1271 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 CARD9Q9H257 536 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 UCK1Q9HA47 277 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 CHMP5Q9NZZ3 219 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 MYO1AQ9UBC5 1043 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 POLHQ9Y253 713 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 ADGRG1Q9Y653 693 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 UNC79Q9P2D8 2635 aa22.45■■□□□ 1.18
PVT1-218ENST00000523328 GRID2O43424 1007 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 IL4RP24394 825 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 SH3BP2P78314 561 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 TMEM135Q86UB9 458 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 PHYKPLQ8IUZ5 450 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 ARRDC2Q8TBH0 407 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 MRPL47Q9HD33 250 aaKnown RBP22.44■■□□□ 1.18
PVT1-218ENST00000523328 SCHIP1Q9P0W5 487 aaPredicted RBP22.44■■□□□ 1.18
PVT1-218ENST00000523328 ATXN10Q9UBB4 475 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 TLK1Q9UKI8 766 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 SLC30A1Q9Y6M5 507 aa22.44■■□□□ 1.18
PVT1-218ENST00000523328 C1orf232A0A0U1RR37 186 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 TOX3O15405 576 aaPredicted RBP22.43■■□□□ 1.18
PVT1-218ENST00000523328 MFSD11O43934 449 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 RFPL1O75677 317 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 XRCC1P18887 633 aaPredicted RBP22.43■■□□□ 1.18
PVT1-218ENST00000523328 CES1P23141 567 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 GARSP41250 739 aaKnown RBP22.43■■□□□ 1.18
PVT1-218ENST00000523328 UQCRFS1P47985 274 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 RPL26P61254 145 aaKnown RBP22.43■■□□□ 1.18
PVT1-218ENST00000523328 SLC25A11Q02978 314 aaKnown RBP22.43■■□□□ 1.18
PVT1-218ENST00000523328 HIST2H2BCQ6DN03 193 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 TMEM26Q6ZUK4 368 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 AOPEPQ8N6M6 819 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 LPCAT1Q8NF37 534 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 OR6C1Q96RD1 312 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 FAM83DQ9H4H8 585 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 ZNF768Q9H5H4 540 aaKnown RBP22.43■■□□□ 1.18
PVT1-218ENST00000523328 PCDH9Q9HC56 1237 aa22.43■■□□□ 1.18
PVT1-218ENST00000523328 RPL26L1Q9UNX3 145 aaKnown RBP22.43■■□□□ 1.18
PVT1-218ENST00000523328 GOLGA6L3A6NEY3 463 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 KIAA0754O94854 1291 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 NDUFA10O95299 355 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 PDGFAP04085 211 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 MYBL1P10243 752 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 ZNF8P17098 575 aaPredicted RBP22.42■■□□□ 1.18
PVT1-218ENST00000523328 TYRP1P17643 537 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 PRKCIP41743 596 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 SEPHS1P49903 392 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 PMS2P54278 862 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 NIPAL4Q0D2K0 466 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 GALNT2Q10471 571 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 MMRN1Q13201 1228 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 IL11RAQ14626 422 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 ASIC2Q16515 512 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 STAMBPL1Q96FJ0 436 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 TGM7Q96PF1 710 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 KLC4Q9NSK0 619 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 PKD2L2Q9NZM6 624 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 AIPL1Q9NZN9 384 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 KCND3Q9UK17 655 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 PCDHGA6Q9Y5G7 932 aa22.42■■□□□ 1.18
PVT1-218ENST00000523328 SHANK1Q9Y566 2161 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 CDC14CA4D256 554 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 MATN3O15232 486 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 KATNA1O75449 491 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 UBXN7O94888 489 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 SLC19A1P41440 591 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 LEPRP48357 1165 aaKnown RBP22.41■■□□□ 1.18
PVT1-218ENST00000523328 ZNF165P49910 485 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms