RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 SOS1Q07889 1333 aaPredicted RBP4.66□□□□□ -1.66
SGCE-211ENST00000522045 TTC21BQ7Z4L5 1316 aa4.66□□□□□ -1.66
SGCE-211ENST00000522045 XRN1Q8IZH2 1706 aaKnown RBP4.66□□□□□ -1.66
SGCE-211ENST00000522045 CFAP65Q6ZU64 1925 aaKnown RBP4.66□□□□□ -1.66
SGCE-211ENST00000522045 METP08581 1390 aa4.65□□□□□ -1.66
SGCE-211ENST00000522045 ADAMTS13Q76LX8 1427 aa4.65□□□□□ -1.66
SGCE-211ENST00000522045 GOLGA6L9A6NEM1 432 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 ZNF500O60304 480 aaPredicted RBP4.65□□□□□ -1.67
SGCE-211ENST00000522045 REC8O95072 547 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 MBD3O95983 291 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 HSP90AA1P07900 732 aaKnown RBP4.65□□□□□ -1.67
SGCE-211ENST00000522045 EIF2S3P41091 472 aaKnown RBP4.65□□□□□ -1.67
SGCE-211ENST00000522045 RAD23BP54727 409 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 KRTAP10-3P60369 221 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 CHRNDQ07001 517 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 POSTNQ15063 836 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 ANKRD1Q15327 319 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 ZSCAN23Q3MJ62 389 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 ZNF876PQ49A33 203 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 GLIPR1L2Q4G1C9 344 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 LRRC8EQ6NSJ5 796 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 CASC1Q6TDU7 716 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 KCTD8Q6ZWB6 473 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 MTSS1LQ765P7 747 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 TAOK1Q7L7X3 1001 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 RNF113BQ8IZP6 322 aaKnown RBP4.65□□□□□ -1.67
SGCE-211ENST00000522045 C1orf87Q8N0U7 546 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 USP38Q8NB14 1042 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 ABTB1Q969K4 478 aaPredicted RBP4.65□□□□□ -1.67
SGCE-211ENST00000522045 COG3Q96JB2 828 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 FAM167BQ9BTA0 163 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 DDX4Q9NQI0 724 aaKnown RBP4.65□□□□□ -1.67
SGCE-211ENST00000522045 BABAM1Q9NWV8 329 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 FEM1BQ9UK73 627 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 DDX49Q9Y6V7 483 aaKnown RBP4.65□□□□□ -1.67
SGCE-211ENST00000522045 FMN2Q9NZ56 1722 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 NWD1Q149M9 1564 aa4.65□□□□□ -1.67
SGCE-211ENST00000522045 UBR1Q8IWV7 1749 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 HMMRO75330 724 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 TUBBP07437 444 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 MMP2P08253 660 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 HMOX1P09601 288 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 RRM1P23921 792 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 TUBB4BP68371 445 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 EIF4A2Q14240 407 aaKnown RBP4.64□□□□□ -1.67
SGCE-211ENST00000522045 KRT24Q2M2I5 525 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 CCNYL2Q5T2Q4 361 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 SERTAD4-AS1Q5TG53 156 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 NOXA1Q86UR1 476 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 ZNF248Q8NDW4 579 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 VPS37AQ8NEZ2 397 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 BEST2Q8NFU1 509 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 OR10V1Q8NGI7 309 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 DUSP19Q8WTR2 217 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 RILPL2Q969X0 211 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 LGALS12Q96DT0 336 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 ESRP2Q9H6T0 727 aaKnown RBP4.64□□□□□ -1.67
SGCE-211ENST00000522045 HCFC1R1Q9NWW0 138 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 NOL7Q9UMY1 257 aaKnown RBP4.64□□□□□ -1.67
SGCE-211ENST00000522045 FAF1Q9UNN5 650 aaPredicted RBP4.64□□□□□ -1.67
SGCE-211ENST00000522045 STON1Q9Y6Q2 735 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 SBNO1A3KN83 1393 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 PLEKHG1Q9ULL1 1385 aa4.64□□□□□ -1.67
SGCE-211ENST00000522045 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.63□□□□□ -1.67
SGCE-211ENST00000522045 ARHGAP23Q9P227 1491 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 CEP170BQ9Y4F5 1589 aaPredicted RBP4.63□□□□□ -1.67
SGCE-211ENST00000522045 VWA3AA6NCI4 1184 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 G6PDP11413 515 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 PAX1P15863 534 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 HOXA1P49639 335 aaPredicted RBP4.63□□□□□ -1.67
SGCE-211ENST00000522045 ARHGAP17Q68EM7 881 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 ANKRD54Q6NXT1 300 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 CAVIN1Q6NZI2 390 aaKnown RBP4.63□□□□□ -1.67
SGCE-211ENST00000522045 KCTD18Q6PI47 426 aaPredicted RBP4.63□□□□□ -1.67
SGCE-211ENST00000522045 CCDC174Q6PII3 467 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 ZNF852Q6ZMS4 543 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 GPAT4Q86UL3 456 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 MOGAT3Q86VF5 341 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 CADM4Q8NFZ8 388 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 SPPL3Q8TCT6 385 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 ANP32BQ92688 251 aaKnown RBP4.63□□□□□ -1.67
SGCE-211ENST00000522045 C17orf77Q96MU5 243 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 MAP7D2Q96T17 732 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 MKKSQ9NPJ1 570 aaPredicted RBP4.63□□□□□ -1.67
SGCE-211ENST00000522045 SNTG1Q9NSN8 517 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.63□□□□□ -1.67
SGCE-211ENST00000522045 DAAM1Q9Y4D1 1078 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 IGSF1Q8N6C5 1336 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 TTC21AQ8NDW8 1320 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 FLT4P35916 1363 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 TNRQ92752 1358 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 TMEM2Q9UHN6 1383 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 ANKARQ7Z5J8 1434 aa4.63□□□□□ -1.67
SGCE-211ENST00000522045 SLIT1O75093 1534 aa4.62□□□□□ -1.67
SGCE-211ENST00000522045 PIK3C2AO00443 1686 aa4.62□□□□□ -1.67
SGCE-211ENST00000522045 B9A039 149 aa4.62□□□□□ -1.67
SGCE-211ENST00000522045 BCAT2O15382 392 aaPredicted RBP4.62□□□□□ -1.67
SGCE-211ENST00000522045 KLK10O43240 276 aa4.62□□□□□ -1.67
SGCE-211ENST00000522045 HTATSF1O43719 755 aaKnown RBP4.62□□□□□ -1.67
SGCE-211ENST00000522045 CNPP09543 421 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms