RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 FLRT2O43155 660 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 LDOC1O95751 146 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 ZNF8P17098 575 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 TRIM23P36406 574 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 GRK6P43250 576 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 PPM1FP49593 454 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 DPTQ07507 201 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 PTK6Q13882 451 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 HS1BP3Q53T59 392 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 ZNF534Q76KX8 674 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 LDB1Q86U70 411 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 GALNT13Q8IUC8 556 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 TRAPPC5Q8IUR0 188 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 TRAM1L1Q8N609 369 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 FAM46DQ8NEK8 389 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 OR6P1Q8NGX9 317 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 TBATAQ96M53 351 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 OR2M4Q96R27 311 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 ZSCAN5AQ9BUG6 496 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 CHRAC1Q9NRG0 131 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 PCOLCE2Q9UKZ9 415 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 MAD1L1Q9Y6D9 718 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 SLC30A1Q9Y6M5 507 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 SPEGQ15772 3267 aa12.14□□□□□ -0.47
CTNNA1-211ENST00000518910 CCDC162PA2VCL2 907 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 ERI2A8K979 691 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 GOLGA8KD6RF30 607 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 GOLGA8TH3BQL2 631 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 CASC3O15234 703 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 RAD51CO43502 376 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 DFNA5O60443 496 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 SUN1O94901 812 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 KCNK5O95279 499 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 SPINK2P20155 84 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 NMBRP28336 390 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 ACTR1BP42025 376 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 RXRGP48443 463 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 DCDC1P59894 354 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 ACTR1AP61163 376 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 SLC7A5Q01650 507 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 PEX6Q13608 980 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 PUM1Q14671 1186 aaKnown RBP eCLIP12.13□□□□□ -0.479e-7■□□□□ 9.3
CTNNA1-211ENST00000518910 TRIP6Q15654 476 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 INSCQ1MX18 579 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 INAVAQ3KP66 663 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 GPRC6AQ5T6X5 926 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 TSTD2Q5T7W7 516 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 C4orf22Q6V702 233 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 KANSL1Q7Z3B3 1105 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 ADGRG6Q86SQ4 1221 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 KLHDC8BQ8IXV7 354 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 BEND7Q8N7W2 519 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 KYQ8NBH2 561 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 SPATA4Q8NEY3 305 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 FAM174AQ8TBP5 190 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 ZNF398Q8TD17 642 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 HDAC10Q969S8 669 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 TTC25Q96NG3 672 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 SRPK1Q96SB4 655 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 DPEP2Q9H4A9 486 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 ARNT2Q9HBZ2 717 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 EIF2B3Q9NR50 452 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 RAD18Q9NS91 495 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 KCTD5Q9NXV2 234 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 BFARQ9NZS9 450 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 GPR34Q9UPC5 381 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 NEU2Q9Y3R4 380 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 TCAF1Q9Y4C2 921 aa12.13□□□□□ -0.47
CTNNA1-211ENST00000518910 COL5A1P20908 1838 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 HEATR9A2RTY3 570 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 EFCAB8A8MWE9 144 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 CCDC188H7C350 402 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 YY2O15391 372 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 YKT6O15498 198 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 GRID2O43424 1007 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 PCDHGA12O60330 932 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 CDK14O94921 469 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 TOP3BO95985 862 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 GOT2P00505 430 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 ZNF883P0CG24 379 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 ITGB6P18564 788 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 TPSB2P20231 275 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 MSH3P20585 1137 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 ITGALP20701 1170 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 BLKP51451 505 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 ITGA8P53708 1063 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 MAZP56270 477 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 PRAMEP78395 509 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 CTBSQ01459 385 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 CKAP4Q07065 602 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 FOXC1Q12948 553 aa12.12□□□□□ -0.47
CTNNA1-211ENST00000518910 GTF2H3Q13889 308 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms