RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LPIN1Q14693 890 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 RCN1Q15293 331 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 CSRP2Q16527 193 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SMN1Q16637 294 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 HADHQ16836 314 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 CD300EQ496F6 205 aaPredicted RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCDC152Q4G0S7 254 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ATP13A5Q4VNC0 1218 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 EPC2Q52LR7 807 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPATA46Q5T0L3 261 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 C1orf185Q5T7R7 199 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 AGBL4Q5VU57 503 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 PODNL1Q6PEZ8 512 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 KYAT3Q6YP21 454 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 USP30Q70CQ3 517 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 DET1Q7L5Y6 550 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 HIST3H2AQ7L7L0 130 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 PRSS42Q7Z5A4 293 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADGRE4PQ86SQ3 457 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 TXNRD3Q86VQ6 643 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC22A9Q8IVM8 553 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZCCHC9Q8N567 271 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 L3MBTL4Q8NA19 623 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM184AQ8NB25 1140 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 BBOF1Q8ND07 529 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 TMEM185AQ8NFB2 350 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 NUDT10Q8NFP7 164 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF671Q8TAW3 534 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ELP5Q8TE02 316 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 UBLCP1Q8WVY7 318 aaPredicted RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SELENOMQ8WWX9 145 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 MYLIPQ8WY64 445 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 GLG1Q92896 1179 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 FBXO32Q969P5 355 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SGF29Q96ES7 293 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 C14orf79Q96F83 325 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 NUDT11Q96G61 164 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 WDYHV1Q96HA8 205 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 QRFPRQ96P65 431 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 LRRC37BQ96QE4 947 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SSX3Q99909 188 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 GTPBP2Q9BX10 602 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 POLR1EQ9GZS1 481 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 TKTL2Q9H0I9 626 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 DDX47Q9H0S4 455 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 STMN4Q9H169 189 aaPredicted RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 VCPKMTQ9H867 229 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 RMND5AQ9H871 391 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ECT2Q9H8V3 914 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC28A3Q9HAS3 691 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 GLOD4Q9HC38 313 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF304Q9HCX3 659 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 PRDM7Q9NQW5 492 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARL15Q9NXU5 204 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 NOP53Q9NZM5 478 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 LARSQ9P2J5 1176 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 TRIM10Q9UDY6 481 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 MAD2L2Q9UI95 211 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 PSME2Q9UL46 239 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 GRID1Q9ULK0 1009 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 KCNK6Q9Y257 313 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 B3GNT3Q9Y2A9 372 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 LSM4Q9Y4Z0 139 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPACA6W5XKT8 324 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARHGEF40Q8TER5 1519 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPATA31A3Q5VYP0 1347 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 C15orf38-AP3S2A0A0A6YYH1 394 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 A0A1W2PPM1 405 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 A0A1W2PRX2 142 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TRIM49BA6NDI0 452 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 H0YIV9 168 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TRIM77I1YAP6 450 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 HS3ST1O14792 307 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CTDSPLO15194 276 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 SMAD9O15198 467 aaKnown RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPRY2O43597 315 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TRIAP1O43715 76 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 E2F6O75461 281 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 DAB1O75553 588 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CYP7B1O75881 506 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 MT-CYBP00156 380 aaPredicted RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 KRT6BP04259 564 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CHRM2P08172 466 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 HOXB5P09067 269 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 RHOXF2BP0C7M4 288 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 POLR2MP0CAP2 368 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 VSIG8P0DPA2 414 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 EPB41P11171 864 aaKnown RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 FCGR2AP12318 317 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 GCSHP23434 173 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CYP2F1P24903 491 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 ALDH4A1P30038 563 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CORO1AP31146 461 aaKnown RBP3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCR1P32246 355 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 PTGER3P43115 390 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 KRT6CP48668 564 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CD97P48960 835 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 CLDN2P57739 230 aa3.93□□□□□ -1.78
RNU4-60P-201ENST00000517239 TAS2R40P59535 323 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms