RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 MAP7D2Q96T17 732 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 TMEM47Q9BQJ4 181 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 MXD3Q9BW11 206 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 GLIS2Q9BZE0 524 aaPredicted RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 FAM234AQ9H0X4 552 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CCDC68Q9H2F9 335 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 GPR108Q9NPR9 543 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 SEPT11Q9NVA2 429 aaKnown RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 TMEM51Q9NW97 253 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 RCOR1Q9UKL0 485 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 ZNF215Q9UL58 517 aaPredicted RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 RABGAP1Q9Y3P9 1069 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 SESN1Q9Y6P5 492 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 UBR2Q8IWV8 1755 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 CBY3A6NI87 242 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 OR6C75A6NL08 312 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 NKX2-2O95096 273 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 CRYABP02511 175 aaKnown RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 CLTBP09497 229 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 UBTFL1P0CB47 393 aaPredicted RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 LAMP2P13473 410 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 FBLP22087 321 aaKnown RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 HOXD3P31249 432 aaPredicted RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 RYKP34925 604 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 PBX3P40426 434 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 ROR2Q01974 943 aaKnown RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 TRAF2Q12933 501 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 LAMB3Q13751 1172 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 WTAPQ15007 396 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 SOWAHAQ2M3V2 549 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 COL28A1Q2UY09 1125 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 ALDH1L2Q3SY69 923 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 CAVIN4Q5BKX8 364 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 FNBP1LQ5T0N5 605 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 SNX30Q5VWJ9 437 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 TTI2Q6NXR4 508 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 CYP20A1Q6UW02 462 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 ZNF367Q7RTV3 350 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 C17orf53Q8N3J3 647 aaPredicted RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 TTC39CQ8N584 583 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 NRACQ8N912 160 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 TEX45Q8NA69 505 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 ENGASEQ8NFI3 743 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 TRIB2Q92519 343 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 SGCDQ92629 289 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 APOLD1Q96LR9 279 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 NEUROD6Q96NK8 337 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 PUS3Q9BZE2 481 aaKnown RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 API5Q9BZZ5 524 aaKnown RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 COA1Q9GZY4 146 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 SIL1Q9H173 461 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 MUC13Q9H3R2 512 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 SLC28A3Q9HAS3 691 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 NSMCE4AQ9NXX6 385 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 OR6C3Q9NZP0 311 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 INTS6Q9UL03 887 aaKnown RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 TMEM5Q9Y2B1 443 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 CAPN7Q9Y6W3 813 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 PIAS3Q9Y6X2 628 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 DLG5Q8TDM6 1919 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 SLX4Q8IY92 1834 aa4.3□□□□□ -1.72
HTT-210ENST00000512909 SIPA1L3O60292 1781 aaPredicted RBP4.3□□□□□ -1.72
HTT-210ENST00000512909 COL24A1Q17RW2 1714 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 CHD4Q14839 1912 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 PTPRCP08575 1304 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 A0A0G2JK05 382 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 A0A1B0GVM2 712 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 DYTNA2CJ06 578 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 A6NCN8 305 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 B4DLN1 442 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 NPIPB11E5RHQ5 1161 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 LDLRAD4O15165 306 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 SERPINI2O75830 405 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 PRSS2P07478 247 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 ITGAXP20702 1163 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 SAT1P21673 171 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 RPS12P25398 132 aaKnown RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 C21orf33P30042 268 aaPredicted RBP4.29□□□□□ -1.72
HTT-210ENST00000512909 NF2P35240 595 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 MATR3P43243 847 aaKnown RBP eCLIP4.29□□□□□ -1.72
HTT-210ENST00000512909 GYG1P46976 350 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 NUDT6P53370 316 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 F2RL1P55085 397 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 HUNKP57058 714 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 SELENOVP59797 346 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 CUL4AQ13619 759 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 FGFBP1Q14512 234 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 DUSP6Q16828 381 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 C6orf141Q5SZD1 244 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 SPATA1Q5VX52 437 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 SHFQ7M4L6 423 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 ARHGAP12Q8IWW6 846 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 CCDC13Q8IYE1 715 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 ZBTB2Q8N680 514 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 NSMCE1Q8WV22 266 aa4.29□□□□□ -1.72
HTT-210ENST00000512909 PSPC1Q8WXF1 523 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms