RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 PDZD7Q9H5P4 517 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLC28A3Q9HAS3 691 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 GPR108Q9NPR9 543 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PLSCR4Q9NRQ2 329 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM51Q9NW97 253 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 NKIRAS2Q9NYR9 191 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 FBXL17Q9UF56 701 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 R3HDM2Q9Y2K5 976 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 FRMD4BQ9Y2L6 1034 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 NFE2L3Q9Y4A8 694 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 CACNA1FO60840 1977 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 MARF1Q9Y4F3 1742 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 MRC1P22897 1456 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SOS1Q07889 1333 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 TTC21BQ7Z4L5 1316 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 USP42Q9H9J4 1324 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 IGLV5-39A0A0G2JS06 123 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM202A6NGA9 273 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 A8MV72 311 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 H3BQ06 376 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 I6L893 689 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 CTDSP2O14595 271 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SCAMP1O15126 338 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 P4HA2O15460 535 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 HCRTR2O43614 444 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 STX6O43752 255 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 HS6ST1O60243 411 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PPFIA2O75334 1257 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SYF2O95926 243 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 CCDC192P0DO97 292 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM11P17152 192 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SYT1P21579 422 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 NNMTP40261 264 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MRPL12P52815 198 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PMS2P54278 862 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 NANOS3P60323 173 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 IFI35P80217 286 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SSBP2P81877 361 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PPATQ06203 517 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 AIMP2Q13155 320 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 KLF9Q13886 244 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MYBPC2Q14324 1141 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 NEDD9Q14511 834 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SHBQ15464 509 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 ASTE1Q2TB18 679 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PRTGQ2VWP7 1150 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 ODF3L2Q3SX64 289 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MMEL1Q495T6 779 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 CDONQ4KMG0 1287 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SYCE2Q6PIF2 218 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 Q6ZSV7 163 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 Q6ZTK2 550 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 RUFY3Q7L099 469 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MON1BQ7L1V2 547 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 LINGO2Q7L985 606 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZNF367Q7RTV3 350 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PATL1Q86TB9 770 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PLA2G4DQ86XP0 818 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SRRM1Q8IYB3 904 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MMP21Q8N119 569 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MIGA1Q8NAN2 632 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SCCPDHQ8NBX0 429 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 C7orf57Q8NEG2 295 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MPLKIPQ8TAP9 179 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM163Q8TC26 289 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 DENND1AQ8TEH3 1009 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SGCDQ92629 289 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 IGSF8Q969P0 613 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PGAM5Q96HS1 289 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLC41A2Q96JW4 573 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 NLRP4Q96MN2 994 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SERINC2Q96SA4 455 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 FAM110AQ9BQ89 295 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLF1Q9BQI6 1058 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 CDK19Q9BWU1 502 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 UPF3BQ9BZI7 483 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 LRRCC1Q9C099 1032 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 LSG1Q9H089 658 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 FOXP1Q9H334 677 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 NDST4Q9H3R1 872 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PLK3Q9H4B4 646 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PDE7BQ9NP56 450 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 KRCC1Q9NPI7 259 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 DDX19AQ9NUU7 478 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SETD4Q9NVD3 440 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SUCLA2Q9P2R7 463 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 SMC3Q9UQE7 1217 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 ERVK-11Q9UQG0 969 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 BTBD3Q9Y2F9 522 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 ATP6V1DQ9Y5K8 247 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MAU2Q9Y6X3 613 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 TCHHQ07283 1943 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 MAP3K5Q99683 1374 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 JCADQ9P266 1359 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 A2ML1A8K2U0 1454 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 NWD1Q149M9 1564 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 PIK3C2AO00443 1686 aa3.2□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZNF804BA4D1E1 1349 aa3.19□□□□□ -1.9
CALCOCO2-216ENST00000509784 AGLP35573 1532 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms