RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 ROGDIQ9GZN7 287 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 OR51V1Q9H2C8 321 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 FAM124BQ9H5Z6 455 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 UBE2TQ9NPD8 197 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 UCKL1Q9NWZ5 548 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PPP1R14DQ9NXH3 145 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ARL15Q9NXU5 204 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SPANXCQ9NY87 97 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SNTG2Q9NY99 539 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 TAS2R8Q9NYW2 309 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 MARK1Q9P0L2 795 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 TRPC4Q9UBN4 977 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 DNAJB9Q9UBS3 223 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 MAP3K2Q9Y2U5 619 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SAMHD1Q9Y3Z3 626 aaKnown RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 PCDHB12Q9Y5F1 795 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 WASF2Q9Y6W5 498 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 V9GYS6 101 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 KDM6AO15550 1401 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 MEIS3P1A6NDR6 274 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 WASH4PA8MWX3 477 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SLC9A3R1O14745 358 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 INPP4BO15327 924 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PROM1O43490 865 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ZNF821O75541 412 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 ERBB2P04626 1255 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SNRPB2P08579 225 aaKnown RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 CDH1P12830 882 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ITPKAP23677 461 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 GSTM2P28161 218 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 NPY2RP49146 381 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SEPHS1P49903 392 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SULT1A2P50226 295 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 TPMTP51580 245 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 JAK3P52333 1124 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ATXN1P54253 815 aaKnown RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 PTPN11Q06124 597 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 BMPR2Q13873 1038 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 EPHA7Q15375 998 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 CTC1Q2NKJ3 1217 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ALG11Q2TAA5 492 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SYTL3Q4VX76 610 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 CCNJQ5T5M9 372 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PIK3R6Q5UE93 754 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 KCNIP4Q6PIL6 250 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 FAM111BQ6SJ93 734 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PRSS55Q6UWB4 352 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 RPTNQ6XPR3 784 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 GDPGP1Q6ZNW5 385 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 C3orf62Q6ZUJ4 267 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PID1Q7Z2X4 250 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 CD163Q86VB7 1156 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 AMIGO1Q86WK6 493 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 TDRPQ86YL5 185 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 REXO1L1PQ8IX06 675 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 GDPD1Q8N9F7 314 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ZSCAN1Q8NBB4 408 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 GALNT11Q8NCW6 608 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 MCPH1Q8NEM0 835 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 TSTD1Q8NFU3 115 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ZFP28Q8NHY6 868 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 MRPS31Q92665 395 aaKnown RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 WFIKKN1Q96NZ8 548 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 WDR24Q96S15 920 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 C2orf40Q9H1Z8 148 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 KCNF1Q9H3M0 494 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 FAM83DQ9H4H8 585 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 NIPAL2Q9H841 368 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 RAVER2Q9HCJ3 691 aaKnown RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 COQ3Q9NZJ6 369 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ADAMTS1Q9UHI8 967 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 VPS51Q9UID3 782 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ZNF232Q9UNY5 417 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PLA2G4CQ9UP65 541 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PDE10AQ9Y233 779 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 USP20Q9Y2K6 914 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 CCDC61Q9Y6R9 512 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 PALLDQ8WX93 1383 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 GRXCR2A6NFK2 248 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SDR42E2A6NKP2 422 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 HACD1B0YJ81 288 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 H0YAE9 185 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SLC33A1O00400 549 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 RIPK2O43353 540 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 LATO43561 262 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 RFPL3O75679 317 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 RGS9O75916 674 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 DFFBO76075 338 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 OR6B1O95007 311 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SEC24BO95487 1268 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 HPRP00739 348 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 CYP2E1P05181 493 aaPredicted RBP3.56□□□□□ -1.84
USP53-205ENST00000509769 CSF1P09603 554 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 CYP4B1P13584 511 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 AXLP30530 894 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 CXCR5P32302 372 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 HTR7P34969 479 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 GLRBP48167 497 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 SCNN1BP51168 640 aa3.56□□□□□ -1.84
USP53-205ENST00000509769 ITGA8P53708 1063 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms