RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CBSLP0DN79 551 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PABPC1P11940 636 aaKnown RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 SRCP12931 536 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PCSK2P16519 638 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 ZNF30P17039 623 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 CHRM3P20309 590 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 ITGAXP20702 1163 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 DGKAP23743 735 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 CD70P32970 193 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 CBSP35520 551 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 CLCN7P51798 805 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PGGT1BP53609 377 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 MTTPP55157 894 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PKNOX1P55347 436 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 STX1BP61266 288 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 TBL3Q12788 808 aaKnown RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 NFATC2Q13469 925 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 E2F5Q15329 346 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 OR4D1Q15615 310 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 CDKN3Q16667 212 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 GSTA3Q16772 222 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PFKFB4Q16877 469 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 TTLL9Q3SXZ7 439 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SPATS1Q496A3 300 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SETMARQ53H47 684 aaPredicted RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 CARD16Q5EG05 197 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 CTSL3PQ5NE16 218 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 TMEM240Q5SV17 173 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 KANK2Q63ZY3 851 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PTRHD1Q6GMV3 140 aaKnown RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 PSAPL1Q6NUJ1 521 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 BRAT1Q6PJG6 821 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 HACD2Q6Y1H2 254 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 MACC1Q6ZN28 852 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 RIPOR1Q6ZS17 1223 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 KIAA0907Q7Z7F0 614 aaPredicted RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 SNX32Q86XE0 403 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 GPSM1Q86YR5 675 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 MYLK4Q86YV6 388 aaPredicted RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 CAMK1DQ8IU85 385 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 RYBPQ8N488 228 aaPredicted RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 POU5F2Q8N7G0 328 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 OR56A4Q8NGH8 313 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SPPL3Q8TCT6 385 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 ZNF483Q8TF39 744 aaPredicted RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 TSPEARQ8WU66 669 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 IRF7Q92985 503 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 FUBP1Q96AE4 644 aaKnown RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 C19orf60Q96EN9 201 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 LRIG1Q96JA1 1093 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 PANX3Q96QZ0 392 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SLC25A23Q9BV35 468 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 MRPL1Q9BYD6 325 aaKnown RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 TM6SF2Q9BZW4 377 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 VCX3BQ9H321 246 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 SUV39H2Q9H5I1 410 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 CDH22Q9UJ99 828 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 FAM50BQ9Y247 325 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 L3MBTL1Q9Y468 752 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 COPG1Q9Y678 874 aaKnown RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.17□□□□□ -0.94
HTT-205ENST00000509043 DENND4CQ5VZ89 1909 aa9.17□□□□□ -0.94
HTT-205ENST00000509043 HELZP42694 1942 aaKnown RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 K7ERQ8 282 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 UBXN8O00124 270 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 PSMD12O00232 456 aaPredicted RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 RAD51BO15315 384 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 SMAD6O43541 496 aaKnown RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 ABCB7O75027 752 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 CLASP2O75122 1294 aaKnown RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 ECI2O75521 394 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 ZNF821O75541 412 aaPredicted RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 CDK14O94921 469 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 PAPLNO95428 1278 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 ASLP04424 464 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 RHOP08100 348 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 UROSP10746 265 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 ENO3P13929 434 aaPredicted RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 ACRV1P26436 265 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 HLA-FP30511 346 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 HNF1BP35680 557 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 NNMTP40261 264 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 NSG1P42857 185 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 RECQLP46063 649 aaPredicted RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 CCR10P46092 362 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 KCNC1P48547 511 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 PSMD8P48556 350 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 PTDSS1P48651 473 aaKnown RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 NUDT2P50583 147 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 ERVFC1P60507 584 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 SLC25A3Q00325 362 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 ECT2LQ008S8 904 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 CLCQ05315 142 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 ART3Q13508 389 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 RCN1Q15293 331 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 PCBP2Q15366 365 aaKnown RBP eCLIP9.16□□□□□ -0.94
HTT-205ENST00000509043 TSNQ15631 228 aaKnown RBP9.16□□□□□ -0.94
HTT-205ENST00000509043 ZNF77Q15935 545 aa9.16□□□□□ -0.94
HTT-205ENST00000509043 UGT3A2Q3SY77 523 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms