RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PRKAB2O43741 272 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 YBX3P16989 372 aaKnown RBP eCLIP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CCNA2P20248 432 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CMA1P23946 247 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MAPKAPK2P49137 400 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PPP5CP53041 499 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 AIF1P55008 147 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PLA1AQ53H76 456 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 RABGAP1LQ5R372 815 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 METTL11BQ5VVY1 283 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 RESP18Q5W5W9 173 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 STEAP3Q658P3 488 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF365Q70YC5 407 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 LAPTM4BQ86VI4 370 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF444Q8N0Y2 327 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MIGA1Q8NAN2 632 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SCFD1Q8WVM8 642 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NDRG1Q92597 394 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SFXN2Q96NB2 322 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CAMK1GQ96NX5 476 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PRMT1Q99873 361 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FUCA2Q9BTY2 467 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MRPS26Q9BYN8 205 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 WDCPQ9H6R7 721 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MINDY3Q9H8M7 445 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ZFAND3Q9H8U3 227 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CAB39LQ9H9S4 337 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ENTPD7Q9NQZ7 604 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MOCS1Q9NZB8 636 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 GCNT4Q9P109 453 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CROTQ9UKG9 612 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 A0A1B0GVC2 190 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 L7N2F9 121 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 JAK2O60674 1132 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 IPO13O94829 963 aaKnown RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 SPDEFO95238 335 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 CLPTM1O96005 669 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 RRASP10301 218 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 FCER1AP12319 257 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 PECAM1P16284 738 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 CYP2A7P20853 494 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ENTPD1P49961 510 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 FOLH1Q04609 750 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 GABPAQ06546 454 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 DLG1Q12959 904 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 SLC39A14Q15043 492 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 NCF4Q15080 339 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 MFSD14BQ5SR56 506 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 DCAF12L1Q5VU92 463 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 MRNIPQ6NTE8 343 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 POTEAQ6S8J7 498 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC190Q86UF4 302 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 GAS2L3Q86XJ1 694 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ZFPM1Q8IX07 1006 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM192Q8IY95 271 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 TMEFF1Q8IYR6 380 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ASCC1Q8N9N2 400 aaKnown RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 BHLHE23Q8NDY6 225 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 CNOT6LQ96LI5 555 aaKnown RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 CHID1Q9BWS9 393 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 FOXQ1Q9C009 403 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ZCCHC2Q9C0B9 1178 aaKnown RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 PITPNC1Q9UKF7 332 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 MGAT4BQ9UQ53 548 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 A4D1N5 150 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ACOD1A6NK06 481 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 CES2O00748 559 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 SLC16A6O15403 523 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 SMAD6O43541 496 aaKnown RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 OR10H2O60403 315 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 TULP3O75386 442 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 LGI1O95970 557 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 SNHG28P0DPA3 235 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ITGB6P18564 788 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 PPP1R2P41236 205 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 HTR2BP41595 481 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF177Q13360 481 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 DYNC1I2Q13409 638 aaKnown RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 TUSC3Q13454 348 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 TTLL4Q14679 1199 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 PKDCCQ504Y2 493 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 C1orf185Q5T7R7 199 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 GARNL3Q5VVW2 1013 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 PPP1R2P3Q6NXS1 205 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ADGRD1Q6QNK2 874 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 BEND4Q6ZU67 534 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 LONP2Q86WA8 852 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM173Q86WV6 379 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 LINC00346Q8IVM7 164 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM130Q8N3G9 435 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ANKRD13CQ8N6S4 541 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF366Q8N895 744 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ENDOVQ8N8Q3 282 aaKnown RBP3.9□□□□□ -1.78
NEDD4-209ENST00000508871 LINC00301Q8NCQ3 95 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 OR10Q1Q8NGQ4 319 aa3.9□□□□□ -1.78
NEDD4-209ENST00000508871 ING5Q8WYH8 240 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms