RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 SHOC2Q9UQ13 582 aa7.96□□□□□ -1.14
RFC1-207ENST00000504554 SLC17A4Q9Y2C5 497 aa7.96□□□□□ -1.14
RFC1-207ENST00000504554 R3HDM2Q9Y2K5 976 aaKnown RBP7.96□□□□□ -1.14
RFC1-207ENST00000504554 PTPRBP23467 1997 aa7.96□□□□□ -1.14
RFC1-207ENST00000504554 CFAP47Q6ZTR5 3102 aa7.96□□□□□ -1.14
RFC1-207ENST00000504554 USP24Q9UPU5 2620 aa7.96□□□□□ -1.14
RFC1-207ENST00000504554 KMT2BQ9UMN6 2715 aaPredicted RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 MAP1BP46821 2468 aaKnown RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 LOC285095A0A1B0GVY8 99 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 CCDC66A2RUB6 948 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 ANKRD33BA6NCL7 494 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 SRRM3A6NNA2 597 aaPredicted RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 HACD1B0YJ81 288 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 H7C0C1 242 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 MEN1O00255 615 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 DNAJC6O75061 913 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 ATP1A1P05023 1023 aaKnown RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 FGF1P05230 155 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 CTSEP14091 401 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 GPR1P46091 355 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 GNPDA1P46926 289 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 ATP5OP48047 213 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 BLKP51451 505 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 WNT3AP56704 352 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 RWDD2BP57060 319 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 SRSF11Q05519 484 aaKnown RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 KLF1Q13351 362 aaPredicted RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 PTPRCAPQ14761 206 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 ELOCQ15369 112 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 SLC14A2Q15849 920 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 OGFOD3Q6PK18 319 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 MARK2Q7KZI7 788 aaKnown RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 ZNF765Q7L2R6 523 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 PID1Q7Z2X4 250 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 TMC3Q7Z5M5 1100 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 TAF8Q7Z7C8 310 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 PROSER1Q86XN7 944 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 NRSN1Q8IZ57 195 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 TTC30BQ8N4P2 665 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 SLC25A41Q8N5S1 370 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 ARL10Q8N8L6 244 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 GPR156Q8NFN8 814 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 MAPK15Q8TD08 544 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 GPBAR1Q8TDU6 330 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 PATE1Q8WXA2 126 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 CCDC74AQ96AQ1 378 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 HES6Q96HZ4 224 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 BPIFA1Q9NP55 256 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 ARFGAP3Q9NP61 516 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 PHPT1Q9NRX4 125 aaPredicted RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 KLHL8Q9P2G9 620 aaPredicted RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 GULP1Q9UBP9 304 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 RALYQ9UKM9 306 aaKnown RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 AMFRQ9UKV5 643 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 PADI4Q9UM07 663 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.95□□□□□ -1.14
RFC1-207ENST00000504554 ZNF711Q9Y462 761 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 PRKAB1Q9Y478 270 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 COL27A1Q8IZC6 1860 aaPredicted RBP7.95□□□□□ -1.14
RFC1-207ENST00000504554 IGF2RP11717 2491 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 LRP4O75096 1905 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 EPG5Q9HCE0 2579 aa7.95□□□□□ -1.14
RFC1-207ENST00000504554 A0A1W2PQM1 296 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 B4DGG1 531 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 NTN3O00634 580 aaPredicted RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 GPR39O43194 453 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 BUD23O43709 281 aaKnown RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 TLX3O43711 291 aaPredicted RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 IPO7O95373 1038 aaKnown RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 NDST3O95803 873 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 EML2O95834 649 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 AGTP01019 485 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 SLC4A1P02730 911 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 GP1BAP07359 652 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 IVLP07476 585 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 RBP3P10745 1247 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 BPIP17213 487 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 CA4P22748 312 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 ADRA1AP35348 466 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 ADCY8P40145 1251 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 MAZP56270 477 aaKnown RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 EIF3EP60228 445 aaKnown RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 CCZ1BP86790 482 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 CCZ1P86791 482 aaPredicted RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 E2F1Q01094 437 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 CTBSQ01459 385 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 KIF5AQ12840 1032 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 MSLNQ13421 630 aaPredicted RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 XRCC4Q13426 336 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 HLTFQ14527 1009 aaKnown RBP eCLIP7.94□□□□□ -1.145e-6■■□□□ 12.8
RFC1-207ENST00000504554 KCTD19Q17RG1 926 aaPredicted RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 KHDC1Q4VXA5 237 aaKnown RBP7.94□□□□□ -1.14
RFC1-207ENST00000504554 PYCR3Q53H96 274 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 HS1BP3Q53T59 392 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 SIRPB2Q5JXA9 342 aa7.94□□□□□ -1.14
RFC1-207ENST00000504554 ALS2CLQ60I27 953 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms