RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 MBLAC1A4D2B0 266 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PDLIM1O00151 329 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 AGRPO00253 132 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SOCS2O14508 198 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TRIM24O15164 1050 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 UBDO15205 165 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CACNG3O60359 315 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 FOXD2O60548 495 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 RNGTTO60942 597 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CLEC3AO75596 197 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SLC4A1P02730 911 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 GNAO1P09471 354 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PSMC3P17980 439 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CHRM3P20309 590 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ATP5F1P24539 256 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 LRPAP1P30533 357 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 RGS2P41220 211 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 BRCC3P46736 316 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TM4SF4P48230 202 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 NDST2P52849 883 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CDKN2DP55273 166 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 RPL26P61254 145 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CACNB2Q08289 660 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 HERC3Q15034 1050 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TBC1D25Q3MII6 688 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TIGD5Q53EQ6 642 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TECRLQ5HYJ1 363 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 C6orf10Q5SRN2 563 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 GPR158Q5T848 1215 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 NEPROQ6NW34 567 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 EGFL6Q8IUX8 553 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 FUNDC1Q8IVP5 155 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CNTN4Q8IWV2 1026 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CHERPQ8IWX8 916 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CPNE9Q8IYJ1 553 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ATPAF2Q8N5M1 289 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PPHLN1Q8NEY8 458 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CANT1Q8WVQ1 401 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 IRF7Q92985 503 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 MYLPFQ96A32 169 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CDC6Q99741 560 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 MRPL57Q9BQC6 102 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TMEM79Q9BSE2 394 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 EPB41L1Q9H4G0 881 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ALG9Q9H6U8 611 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TREX1Q9NSU2 369 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 OLAHQ9NV23 265 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ATXN10Q9UBB4 475 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 MID2Q9UJV3 735 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CRYL1Q9Y2S2 319 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 A0A1B0GTL3 188 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ARHGEF37A1IGU5 675 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ANKRD34BA5PLL1 514 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SAC3D1A6NKF1 404 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SLCO1B7G3V0H7 640 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TMX2-CTNND1H3BSU7 103 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 MAGEB3O15480 346 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 XPOTO43592 962 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 STRNO43815 780 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 NPHS1O60500 1241 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TPST1O60507 370 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 GPC4O75487 556 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SIX3O95343 332 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CLIC3O95833 236 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CELA2BP08218 269 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 MYL3P08590 195 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ALDOCP09972 364 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PRSS56P0CW18 603 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CDK4P11802 303 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 MYCLP1P12525 358 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 HADHAP40939 763 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SCNN1GP51170 649 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SLC7A2P52569 658 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PRKAA2P54646 552 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SLC12A2P55011 1212 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 FOXA1P55317 472 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 WNT3AP56704 352 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PRAMEP78395 509 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ADAM17P78536 824 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SREBF2Q12772 1141 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CAPRIN1Q14444 709 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 RFTN1Q14699 578 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 LRRC23Q53EV4 343 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SDHAF4Q5VUM1 108 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 DCLRE1AQ6PJP8 1040 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 RANBP10Q6VN20 620 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 LINC00523Q86TU6 105 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 SETD3Q86TU7 594 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 RYBPQ8N488 228 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 DTWD1Q8N5C7 304 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TSPAN14Q8NG11 270 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 OR52K2Q8NGK3 314 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CYB5D2Q8WUJ1 264 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 CASP10Q92851 521 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PPWD1Q96BP3 646 aaKnown RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 ASB9Q96DX5 294 aa6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 PGAP3Q96FM1 320 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-AS1-202ENST00000504440 TSGA13Q96PP4 275 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms