RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 MYL9P24844 172 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 LILRA4P59901 499 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 LCP2Q13094 533 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 TLCD1Q96CP7 247 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 CLIP3Q96DZ5 547 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 RGPD8O14715 1765 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 SHOX2O60902 331 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 SLC25A12O75746 678 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 CLDN9O95484 217 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 CDH5P33151 784 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 OLR1P78380 273 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 CXXC5Q7LFL8 322 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 MFSD3Q96ES6 412 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 PCED1BQ96HM7 432 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 TBATAQ96M53 351 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 EVLQ9UI08 416 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 FADS3Q9Y5Q0 445 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 A0A1B0GVM2 712 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 TCAF2A6NFQ2 919 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 PMM2O15305 246 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 HMGB3O15347 200 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 TLL1O43897 1013 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 PLIN3O60664 434 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 ITGAXP20702 1163 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 APOBEC3GQ9HC16 384 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 MIOSQ9NXC5 875 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 WWP2O00308 870 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 PER2O15055 1255 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 DNAJA2O60884 412 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 CYP4F2P78329 520 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 MPP1Q00013 466 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 CYP4F3Q08477 520 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 TSTD2Q5T7W7 516 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 PEG10Q86TG7 708 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 TAC4Q86UU9 113 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 POC5Q8NA72 575 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 LEMD2Q8NC56 503 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 DPEP3Q9H4B8 488 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 PHPT1Q9NRX4 125 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 TRPS1Q9UHF7 1281 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 FZD10Q9ULW2 581 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 COQ4Q9Y3A0 265 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 CCDC182A6NF36 153 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 KCNU1A8MYU2 1149 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 GTPBP1O00178 669 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 UGT2B4P06133 528 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 TAS2R41P59536 307 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 SRP54P61011 504 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 CLCQ05315 142 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 IPPKQ9H8X2 491 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 ABCB10Q9NRK6 738 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 FETUBQ9UGM5 382 aa16.44■□□□□ 0.22
PCDHA1-203ENST00000504120 ERN1O75460 977 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 UROSP10746 265 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 SLC5A9Q2M3M2 681 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 SPPL2CQ8IUH8 684 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 NAT16Q8N8M0 369 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 DGCR14Q96DF8 476 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 ACAT2Q9BWD1 397 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 UGT2B17O75795 530 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 DAOAP59103 153 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 POU5F1Q01860 360 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 HNRNPDQ14103 355 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 ZNF846Q147U1 533 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 LPCAT4Q643R3 524 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 ANKS1BQ7Z6G8 1248 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 FITM2Q8N6M3 262 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 CLHC1Q8NHS4 586 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 PPM1MQ96MI6 270 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 PNPLA8Q9NP80 782 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 IMP3Q9NV31 184 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 HAT1O14929 419 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 TMCC2O75069 709 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 CDK14O94921 469 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 CAPGP40121 348 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 ROR2Q01974 943 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 TOMM20Q15388 145 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 FSTL4Q6MZW2 842 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 KLHL35Q6PF15 583 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 SAPCD2Q86UD0 394 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 BTBD9Q96Q07 612 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 PLK2Q9NYY3 685 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 MAT2BQ9NZL9 334 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 DEC1Q9P2X7 70 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 FBXW11Q9UKB1 542 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 PCDHGB3Q9Y5G1 929 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 C2orf71A6NGG8 1288 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 IGFBP4P22692 258 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 AP1S1P61966 158 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 CYP1B1Q16678 543 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 KLHL12Q53G59 568 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 DENND5AQ6IQ26 1287 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 TMPRSS11BQ86T26 416 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 PHYKPLQ8IUZ5 450 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 ADGRG2Q8IZP9 1017 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 PYROXD2Q8N2H3 581 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 ZNF248Q8NDW4 579 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms