RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 HNRNPA1L2Q32P51 320 aaKnown RBP5.18□□□□□ -1.58
HTT-202ENST00000502820 PRRT3Q5FWE3 981 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 CFAP157Q5JU67 520 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 C9orf64Q5T6V5 341 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 FAXCQ5TGI0 409 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 RNF220Q5VTB9 566 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 DHRS4L2Q6PKH6 230 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 LCLAT1Q6UWP7 414 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 ASB18Q6ZVZ8 466 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 RD3Q7Z3Z2 195 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 KDELC2Q7Z4H8 507 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 CLNKQ7Z7G1 428 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 TMEM110Q86TL2 294 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 TICAM1Q8IUC6 712 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 FAM217AQ8IXS0 508 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 NRSN1Q8IZ57 195 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 SCML4Q8N228 414 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 CCDC110Q8TBZ0 833 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 WFDC5Q8TCV5 224 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 RNF139Q8WU17 664 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 WDR60Q8WVS4 1066 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 C10orf82Q8WW14 230 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 KCTD13Q8WZ19 329 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 TFAP2BQ92481 460 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 KAT5Q92993 513 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 CCDC74AQ96AQ1 378 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 RNF25Q96BH1 459 aaPredicted RBP5.18□□□□□ -1.58
HTT-202ENST00000502820 TMEM74Q96NL1 305 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 CDK5RAP1Q96SZ6 601 aaKnown RBP5.18□□□□□ -1.58
HTT-202ENST00000502820 CGREF1Q99674 301 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 CMKLR1Q99788 373 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 SLX1AQ9BQ83 275 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 ECSITQ9BQ95 431 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 ZSWIM1Q9BR11 485 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 HAUS8Q9BT25 410 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 SLC12A9Q9BXP2 914 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 MRPS26Q9BYN8 205 aaKnown RBP5.18□□□□□ -1.58
HTT-202ENST00000502820 ULBP1Q9BZM6 244 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 DNAI2Q9GZS0 605 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 MYLK2Q9H1R3 596 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 DENND2DQ9H6A0 471 aaPredicted RBP5.18□□□□□ -1.58
HTT-202ENST00000502820 PRDM8Q9NQV8 689 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 RRN3Q9NYV6 651 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 SMARCAL1Q9NZC9 954 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 NCKIPSDQ9NZQ3 722 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 AKAP7Q9P0M2 348 aaPredicted RBP5.18□□□□□ -1.58
HTT-202ENST00000502820 SFMBT1Q9UHJ3 866 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 SLCO3A1Q9UIG8 710 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 TSPAN16Q9UKR8 245 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 KIAA1257Q9ULG3 409 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 PHTF1Q9UMS5 762 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 TFR2Q9UP52 801 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 CNTN6Q9UQ52 1028 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 DENND4CQ5VZ89 1909 aa5.18□□□□□ -1.58
HTT-202ENST00000502820 SPTAN1Q13813 2472 aaKnown RBP5.18□□□□□ -1.58
HTT-202ENST00000502820 TMEM131Q92545 1883 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 ANAPC1Q9H1A4 1944 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 PLXND1Q9Y4D7 1925 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 EDDM13A0A1B0GTR0 161 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 TLDC2A0PJX2 215 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 TYW5A2RUC4 315 aaKnown RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 ZNF891A8MT65 544 aaPredicted RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 C9orf172C9J069 976 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 RASA4BC9J798 803 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 H0YJX3 145 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 STMND1H3BQB6 276 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 KPNA3O00505 521 aaPredicted RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 KLF11O14901 512 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 EPHB6O15197 1021 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 DDX3YO15523 660 aaKnown RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 RASA4O43374 803 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 THAP12O43422 761 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 LATO43561 262 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 DUX1O43812 170 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 FAM155BO75949 473 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 STK10O94804 968 aaKnown RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 TNFAIP8O95379 198 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 ASMTLO95671 621 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 ZBED1O96006 694 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 HNRNPCP07910 306 aaKnown RBP eCLIP5.17□□□□□ -1.58
HTT-202ENST00000502820 SNRPB2P08579 225 aaKnown RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 UCHL3P15374 230 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 ZNF12P17014 697 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 KRT15P19012 456 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 S100A1P23297 94 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 TTKP33981 857 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 PTGIRP43119 386 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 RPL34P49207 117 aaKnown RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 STK19P49842 368 aaPredicted RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 KLK7P49862 253 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 PDX1P52945 283 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 JAM2P57087 298 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 NUP107P57740 925 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 YWHAGP61981 247 aaKnown RBP eCLIP5.17□□□□□ -1.58
HTT-202ENST00000502820 PTK2Q05397 1052 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 ADIGQ0VDE8 80 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 BST2Q10589 180 aaKnown RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 CNTN1Q12860 1018 aa5.17□□□□□ -1.58
HTT-202ENST00000502820 EIF3IQ13347 325 aaKnown RBP5.17□□□□□ -1.58
HTT-202ENST00000502820 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms