RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 A0A1B0GVC2 190 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 A0A1W2PRG0 241 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 NPIPB15A6NHN6 443 aaPredicted RBP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 ANKRD28O15084 1053 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 EIF3DO15371 548 aaKnown RBP eCLIP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 KCNN4O15554 427 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 RTN3O95197 1032 aaPredicted RBP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 IPO7O95373 1038 aaKnown RBP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 CFC1BP0CG36 223 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 CFC1P0CG37 223 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 FAM106CPP0CH98 169 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 NR2F2P24468 414 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 CDKN1AP38936 164 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PBX3P40426 434 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 RGS2P41220 211 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 APOBEC1P41238 236 aaKnown RBP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PIK3CAP42336 1068 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 MMP14P50281 582 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 CRIP2P52943 208 aaPredicted RBP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 CLDN20P56880 219 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 RPS3AP61247 264 aaKnown RBP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PNLIPRP3Q17RR3 467 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 ZSCAN23Q3MJ62 389 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 CDONQ4KMG0 1287 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 CEP85LQ5SZL2 805 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PLEKHM3Q6ZWE6 761 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 ADSSL1Q8N142 457 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PAF1Q8N7H5 531 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PDILTQ8N807 584 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 FRMD1Q8N878 549 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 TMEM116Q8NCL8 245 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 NAXEQ8NCW5 288 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 RDM1Q8NG50 284 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 OR8K5Q8NH50 307 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 THAP6Q8TBB0 222 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 HM13Q8TCT9 377 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 TMEM255BQ8WV15 326 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 SLC44A1Q8WWI5 657 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 ARHGEF26Q96DR7 871 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 ZNF354BQ96LW1 612 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 STRA6Q9BX79 667 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 SIL1Q9H173 461 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 POLR1BQ9H9Y6 1135 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 LTB4R2Q9NPC1 389 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 RRP7BPQ9NSQ0 103 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 COPG2Q9UBF2 871 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 STK39Q9UEW8 545 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 LIMA1Q9UHB6 759 aaKnown RBP2.39□□□□□ -2.03
SMAD1-203ENST00000502342 POLG2Q9UHN1 485 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PADI3Q9ULW8 664 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 GAB2Q9UQC2 676 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 DLGAP4Q9Y2H0 992 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 KCNE2Q9Y6J6 123 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 PRAG1Q86YV5 1406 aa2.39□□□□□ -2.03
SMAD1-203ENST00000502342 IGLV5-45A0A087WSX0 123 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 PLEKHD1A6NEE1 506 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 FAM90A26D6RGX4 464 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 SYNGR3O43761 229 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 PAGE4O60829 102 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 GPC4O75487 556 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 NDUFS3O75489 264 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 CD53P19397 219 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 NR1D1P20393 614 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 UGT1A1P22309 533 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 BSGP35613 385 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 UBA7P41226 1012 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 ARCN1P48444 511 aaKnown RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 GALCP54803 685 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 CD81P60033 236 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 ZBED6P86452 979 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 CSTF3Q12996 717 aaKnown RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 GAGE5Q13069 117 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 GAGE6Q13070 117 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 RBM39Q14498 530 aaKnown RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 MED22Q15528 200 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 TBCEQ15813 527 aaPredicted RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 TSTQ16762 297 aaKnown RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 MRGPRG-AS1Q2M3A8 158 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 ASPRV1Q53RT3 343 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 ZNF805Q5CZA5 627 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 INTS11Q5TA45 600 aaKnown RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 SLC27A1Q6PCB7 646 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 CYP20A1Q6UW02 462 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 CEACAM20Q6UY09 585 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 ZNF704Q6ZNC4 412 aaPredicted RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 DGLUCYQ7Z3D6 616 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 SDCCAG8Q86SQ7 713 aaPredicted RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 CCDC190Q86UF4 302 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 CNBD1Q8NA66 436 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 PCYOX1LQ8NBM8 494 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 OR1J2Q8NGS2 313 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 PPP4R1Q8TF05 950 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 RFFLQ8WZ73 363 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 PERPQ96FX8 193 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 ST6GAL2Q96JF0 529 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 NEUROD6Q96NK8 337 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 PIGMQ9H3S5 423 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 SCPEP1Q9HB40 452 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 PTTG2Q9NZH5 202 aa2.38□□□□□ -2.03
SMAD1-203ENST00000502342 EHD2Q9NZN4 543 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms