RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SHC3Q92529 594 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 RPL3LQ92901 407 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CGRRF1Q99675 332 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 PIP5K1AQ99755 562 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CHCHD6Q9BRQ6 235 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ACAT2Q9BWD1 397 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 NIF3L1Q9GZT8 377 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CISHQ9NSE2 258 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ARMC1Q9NVT9 282 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 DPP3Q9NY33 737 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CACNG4Q9UBN1 327 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 UBA2Q9UBT2 640 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ITGA11Q9UKX5 1188 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 VANGL2Q9ULK5 521 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ANKRD6Q9Y2G4 727 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SCN4AP35499 1836 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CITO14578 2027 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 PHIPQ8WWQ0 1821 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZNF839A8K0R7 811 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 KBTBD13C9JR72 458 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ACKR2O00590 384 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 COPEO14579 308 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 VNN1O95497 513 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 C4BPAP04003 597 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 FGF3P11487 239 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ARF4P18085 180 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 XPAP23025 273 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 EDNRBP24530 442 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SHMT2P34897 504 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 LEPRP48357 1165 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 MAN2A2P49641 1150 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CLCN7P51798 805 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 MRPS15P82914 257 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 LAPTM5Q13571 262 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 POLD3Q15054 466 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CTF1Q16619 201 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 FSCN1Q16658 493 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SMTNL2Q2TAL5 461 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 PAN2Q504Q3 1202 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 MROH9Q5TGP6 573 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 HEATR6Q6AI08 1181 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 OR6B2Q6IFH4 312 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ACAD10Q6JQN1 1059 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 NAPRTQ6XQN6 538 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CRLF3Q8IUI8 442 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 C12orf56Q8IXR9 622 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 EMC1Q8N766 993 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 IL17RDQ8NFM7 739 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZNF606Q8WXB4 792 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 EVPLQ92817 2033 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 TRMT61AQ96FX7 289 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 LRCH3Q96II8 777 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 RADILQ96JH8 1075 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ST6GALNAC4Q9H4F1 302 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ACSS3Q9H6R3 686 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 TLR9Q9NR96 1032 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 TRHDEQ9UKU6 1024 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CNOT6Q9ULM6 557 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 TESMINQ9Y4I5 508 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 WDR90Q96KV7 1748 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 KIAA1217Q5T5P2 1943 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 C9IYK1 514 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SLC22A1O15245 554 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ACOX3O15254 700 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 PI15O43692 258 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 PLOD3O60568 738 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 MSCO60682 206 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CLASP2O75122 1294 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SNAP29O95721 258 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 UGT2B4P06133 528 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SNRPAP09012 282 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 IQCF3P0C7M6 154 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ELNP15502 786 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 EEF1DP29692 281 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ELK3P41970 407 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 CBX5P45973 191 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ID4P47928 161 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 YBEYP58557 167 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 GRSF1Q12849 480 aaKnown RBP eCLIP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SEMA3AQ14563 771 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 SWI5Q1ZZU3 235 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZIK1Q3SY52 487 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 PYCR3Q53H96 274 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 C1orf53Q5VUE5 145 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ATG16L1Q676U5 607 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 TAPT1Q6NXT6 567 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 TRMT10BQ6PF06 316 aaKnown RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 TMEM65Q6PI78 240 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 BBS12Q6ZW61 710 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 DGLUCYQ7Z3D6 616 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 NLRP8Q86W28 1048 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZNF781Q8N8C0 355 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 POC5Q8NA72 575 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 HM13Q8TCT9 377 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 MCEEQ96PE7 176 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 RHNO1Q9BSD3 238 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 RAD21L1Q9H4I0 556 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 PRMT7Q9NVM4 692 aaPredicted RBP5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 FBXL12Q9NXK8 326 aa5.76□□□□□ -1.49
SOX2-OT-218ENST00000498731 NOCTQ9UK39 431 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms