RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 AMD1P17707 334 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 GARSP41250 739 aaKnown RBP13.77□□□□□ -0.21
CCDC58-207ENST00000498466 STC1P52823 247 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 ITKQ08881 620 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 SEMA5AQ13591 1074 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 DNASE1L3Q13609 305 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 CYP4V2Q6ZWL3 525 aaPredicted RBP13.77□□□□□ -0.21
CCDC58-207ENST00000498466 PSTKQ8IV42 348 aaKnown RBP13.77□□□□□ -0.21
CCDC58-207ENST00000498466 TRIM55Q9BYV6 548 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 RMI1Q9H9A7 625 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 NT5MQ9NPB1 228 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 TAS2R14Q9NYV8 317 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 PADI1Q9ULC6 663 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 PCDHGA6Q9Y5G7 932 aa13.77□□□□□ -0.21
CCDC58-207ENST00000498466 TOX3O15405 576 aaPredicted RBP13.76□□□□□ -0.21
CCDC58-207ENST00000498466 GRID2O43424 1007 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 FZD6O60353 706 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 SPAG6O75602 509 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 RECKO95980 971 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 AMPD1P23109 780 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 ARL4AP40617 200 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 PGDP52209 483 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 CDH6P55285 790 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 UBE2IP63279 158 aaKnown RBP13.76□□□□□ -0.21
CCDC58-207ENST00000498466 NADK2Q4G0N4 442 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 TRIM48Q8IWZ4 208 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 CT55Q8WUE5 264 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 PLEKHG4BQ96PX9 1271 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 OSGEPL1Q9H4B0 414 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 CLSTN2Q9H4D0 955 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 ACTL8Q9H568 366 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 ZNF768Q9H5H4 540 aaKnown RBP13.76□□□□□ -0.21
CCDC58-207ENST00000498466 LHX9Q9NQ69 397 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 CASS4Q9NQ75 786 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 ETNK2Q9NVF9 386 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 OGFRQ9NZT2 677 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 DNPEPQ9ULA0 475 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 CNOT6Q9ULM6 557 aaKnown RBP13.76□□□□□ -0.21
CCDC58-207ENST00000498466 MAP4K5Q9Y4K4 846 aa13.76□□□□□ -0.21
CCDC58-207ENST00000498466 TMEM191CA6NGB0 347 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 C21orf140B9A014 251 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 LRCH4O75427 683 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 CLDN7O95471 211 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 VIPP01282 170 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 MT-ND3P03897 115 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 FGF5P12034 268 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 LEPRP48357 1165 aaKnown RBP13.75□□□□□ -0.21
CCDC58-207ENST00000498466 ZNF787Q6DD87 383 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 PLEKHA7Q6IQ23 1121 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 TMEM26Q6ZUK4 368 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 PPP1R3BQ86XI6 285 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC58-207ENST00000498466 SLC25A23Q9BV35 468 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 POLR1EQ9GZS1 481 aaKnown RBP13.75□□□□□ -0.21
CCDC58-207ENST00000498466 UCK1Q9HA47 277 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 KLC4Q9NSK0 619 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 CHKBQ9Y259 395 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 SLC30A1Q9Y6M5 507 aa13.75□□□□□ -0.21
CCDC58-207ENST00000498466 GOLGA6L3A6NEY3 463 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 FADS2P1A8MWK0 482 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 NUAK1O60285 661 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 DDAH2O95865 285 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 XRCC1P18887 633 aaPredicted RBP13.74□□□□□ -0.21
CCDC58-207ENST00000498466 COL8A1P27658 744 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 SERPINB6P35237 376 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CHAF1BQ13112 559 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 DPYSL2Q16555 572 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 SMTNL2Q2TAL5 461 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 EIF2S3LQ2VIR3 472 aaKnown RBP13.74□□□□□ -0.21
CCDC58-207ENST00000498466 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CACHD1Q5VU97 1274 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CDKAL1Q5VV42 579 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CPZQ66K79 652 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CRYBG3Q68DQ2 2970 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 PPP1R2P3Q6NXS1 205 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CYB5D1Q6P9G0 228 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 POLNQ7Z5Q5 900 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 ENOX1Q8TC92 643 aaKnown RBP13.74□□□□□ -0.21
CCDC58-207ENST00000498466 THAP4Q8WY91 577 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 SEC14L1Q92503 715 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 HSPH1Q92598 858 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CSPG4P5Q96PW8 444 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 BRD8Q9H0E9 1235 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CARD9Q9H257 536 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 FAM83DQ9H4H8 585 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 SCHIP1Q9P0W5 487 aaPredicted RBP13.74□□□□□ -0.21
CCDC58-207ENST00000498466 MAP10Q9P2G4 905 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 TTLL3Q9Y4R7 772 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 CELSR2Q9HCU4 2923 aa13.74□□□□□ -0.21
CCDC58-207ENST00000498466 C1orf232A0A0U1RR37 186 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 KIF1CO43896 1103 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 MTA2O94776 668 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 SORBS2O94875 1100 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 ATP1A3P13637 1013 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 FERP16591 822 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 ZNF8P17098 575 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms