RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 PCSK4Q6UW60 755 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 DEF8Q6ZN54 512 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 RBPMS2Q6ZRY4 209 aaKnown RBP3.66□□□□□ -1.82
CALD1-224ENST00000498254 Q6ZSV7 163 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 CACNA2D4Q7Z3S7 1137 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 RD3Q7Z3Z2 195 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 CCDC91Q7Z6B0 441 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 CENPVQ7Z7K6 275 aaPredicted RBP3.66□□□□□ -1.82
CALD1-224ENST00000498254 ADIPOR2Q86V24 386 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 CEP57Q86XR8 500 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 EPHX4Q8IUS5 362 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 RASGEF1CQ8N431 466 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 AFAP1Q8N556 730 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 CAMKVQ8NCB2 501 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 SETD6Q8TBK2 473 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 TRIB2Q92519 343 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 INPP5DQ92835 1189 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 APBB2Q92870 758 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 HDAC11Q96DB2 347 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 ZNF558Q96NG5 402 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 RAB3IPQ96QF0 476 aaPredicted RBP3.66□□□□□ -1.82
CALD1-224ENST00000498254 NUP85Q9BW27 656 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 MMP27Q9H306 513 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 KCNK15Q9H427 330 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 RAD21L1Q9H4I0 556 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 XAB2Q9HCS7 855 aaKnown RBP3.66□□□□□ -1.82
CALD1-224ENST00000498254 CNGB3Q9NQW8 809 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 OLAHQ9NV23 265 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 DNAJB9Q9UBS3 223 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 TUBE1Q9UJT0 475 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 DBNLQ9UJU6 430 aaKnown RBP3.66□□□□□ -1.82
CALD1-224ENST00000498254 OSGIN1Q9UJX0 560 aa3.66□□□□□ -1.82
CALD1-224ENST00000498254 SRPRBQ9Y5M8 271 aaKnown RBP3.66□□□□□ -1.82
CALD1-224ENST00000498254 ZFP37Q9Y6Q3 630 aaPredicted RBP3.66□□□□□ -1.82
CALD1-224ENST00000498254 PROP1O75360 226 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 CELF2O95319 508 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 GH2P01242 217 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 FYNP06241 537 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 CERS1P27544 350 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 GABRA5P31644 462 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 DEKP35659 375 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 RAB28P51157 221 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 ELLP55199 621 aaPredicted RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 CSNK2A1P68400 391 aaPredicted RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 COL10A1Q03692 680 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 TRAF1Q13077 416 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 NFE2L1Q14494 772 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 DAZAP2Q15038 168 aaPredicted RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 MEP1AQ16819 746 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 HYAL4Q2M3T9 481 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 MYLK3Q32MK0 819 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 COLEC12Q5KU26 742 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 DCAF12L2Q5VW00 463 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 ALS2CLQ60I27 953 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 TYW3Q6IPR3 259 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 PLEKHA7Q6IQ23 1121 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 PARM1Q6UWI2 310 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 Q6ZTK2 550 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 INTS8Q75QN2 995 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 ZNF367Q7RTV3 350 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 PATL1Q86TB9 770 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 MCEMP1Q8IX19 187 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 ZNF595Q8IYB9 648 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 CCAR2Q8N163 923 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 BEST3Q8N1M1 668 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 CSNK2A3Q8NEV1 391 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 PRSS3P2Q8NHM4 247 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 BICD2Q8TD16 824 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 PIGOQ8TEQ8 1089 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 DEPDC1BQ8WUY9 529 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 RHBDF1Q96CC6 855 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 KXD1Q9BQD3 176 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 GPR88Q9GZN0 384 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 ISCUQ9H1K1 167 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 PPIL3Q9H2H8 161 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 DENND2DQ9H6A0 471 aaPredicted RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 TASP1Q9H6P5 420 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 TBC1D17Q9HA65 648 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 MMP25Q9NPA2 562 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 SIRT3Q9NTG7 399 aaPredicted RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 TRNAU1APQ9NX07 287 aaKnown RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 CWC25Q9NXE8 425 aaPredicted RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 PCDHA12Q9UN75 941 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 PAM16Q9Y3D7 125 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 SNX5Q9Y5X3 404 aa3.65□□□□□ -1.83
CALD1-224ENST00000498254 ZNF644Q9H582 1327 aaPredicted RBP3.65□□□□□ -1.83
CALD1-224ENST00000498254 WIPF3A6NGB9 483 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 BECN2A8MW95 431 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 E5RJQ4 531 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 H0YAE9 185 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 TMEM189-UBE2V1I3L0A0 370 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 SLC16A5O15375 505 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 ZBTB43O43298 467 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 HSPA12AO43301 675 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 RECQL5O94762 991 aaPredicted RBP3.64□□□□□ -1.83
CALD1-224ENST00000498254 CYP1A2P05177 515 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 PFKFB1P16118 471 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 GPTP24298 496 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 BDKRB2P30411 391 aa3.64□□□□□ -1.83
CALD1-224ENST00000498254 HNRNPH1P31943 449 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms