RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 NME4O00746 187 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 ARPC2O15144 300 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 NOS1APO75052 506 aaPredicted RBP9.02□□□□□ -0.97
HPS4-217ENST00000496385 VNN1O95497 513 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 METTL18O95568 372 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 MYCLP12524 364 aaPredicted RBP9.02□□□□□ -0.97
HPS4-217ENST00000496385 TNNI1P19237 187 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 CES1P23141 567 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 RYKP34925 604 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 POLD2P49005 469 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 CSRP3P50461 194 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 NAGLUP54802 743 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 DNAJB13P59910 316 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 INCA1Q0VD86 236 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 TRAF3Q13114 568 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 DMP1Q13316 513 aaPredicted RBP9.02□□□□□ -0.97
HPS4-217ENST00000496385 MFSD10Q14728 455 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 ZNF792Q3KQV3 632 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 CASC4Q6P4E1 433 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 TRAF7Q6Q0C0 670 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 CYP20A1Q6UW02 462 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 PROSER1Q86XN7 944 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 TCAIMQ8N3R3 496 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 WDTC1Q8N5D0 677 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 BPIFB1Q8TDL5 484 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 MFSD3Q96ES6 412 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 REXO5Q96IC2 774 aaKnown RBP9.02□□□□□ -0.97
HPS4-217ENST00000496385 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 C17orf62Q9BQA9 187 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 C2orf40Q9H1Z8 148 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 KAT8Q9H7Z6 458 aaKnown RBP9.02□□□□□ -0.97
HPS4-217ENST00000496385 WDR6Q9NNW5 1121 aaKnown RBP9.02□□□□□ -0.97
HPS4-217ENST00000496385 B3GNT2Q9NY97 397 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 CCDC167Q9P0B6 97 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.02□□□□□ -0.97
HPS4-217ENST00000496385 POLHQ9Y253 713 aa9.02□□□□□ -0.97
HPS4-217ENST00000496385 KIAA0100Q14667 2235 aaKnown RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 CCDC154A6NI56 674 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 METTL15A6NJ78 407 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 H3BMM5 538 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TPST1O60507 370 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TULP3O75386 442 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 INHAP05111 366 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 IL7P13232 177 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 STMN1P16949 149 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 GMPRP36959 345 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 NR2C2P49116 596 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 SEPHS1P49903 392 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TPD52P55327 224 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 DSTNP60981 165 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 EMX1Q04741 257 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 GPR50Q13585 617 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TKFCQ3LXA3 575 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FSTL4Q6MZW2 842 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 SLC39A4Q6P5W5 647 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FAM171BQ6P995 826 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 CMC1Q7Z7K0 106 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PIGZQ86VD9 579 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FBXO16Q8IX29 292 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 TMEM151AQ8N4L1 468 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 AMER2Q8N7J2 671 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PJA1Q8NG27 643 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 JOSD2Q8TAC2 188 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TSPEARQ8WU66 669 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ARNTL2Q8WYA1 636 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 NCLNQ969V3 563 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TMCO6Q96DC7 493 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ZNF556Q9HAH1 456 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ZFP14Q9HCL3 533 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FAM118AQ9NWS6 357 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 NSMCE4AQ9NXX6 385 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 USE1Q9NZ43 259 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PCSK1NQ9UHG2 260 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TLK1Q9UKI8 766 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TARM1B6A8C7 271 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 SLC1A7O00341 560 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 SLC9A3R1O14745 358 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 MED7O43513 233 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 UGT2B17O75795 530 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 SLC4A1P02730 911 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 HOXB1P14653 301 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 PRKACAP17612 351 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 CCND3P30281 292 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 GNPDA1P46926 289 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 NPTX2P47972 431 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 UGT2B15P54855 530 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 CXCR4P61073 352 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TMEM236Q5W0B7 351 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FBXO46Q6PJ61 603 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 CREB3L2Q70SY1 520 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 RAB43Q86YS6 212 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PQLC3Q8N755 202 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ZFAND1Q8TCF1 268 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FBLIM1Q8WUP2 373 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ZHX1-C8orf76Q96EF9 292 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 CITED4Q96RK1 184 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 UQCC2Q9BRT2 126 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FAM213AQ9BRX8 229 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 C1QTNF7Q9BXJ2 289 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms