RNA–Protein interactions for RNA: ENST00000494664.5

TIMMDC1-208, Transcript of translocase of inner mitochondrial membrane domain containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene TIMMDC1, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMMDC1-208	ENST00000494664	SDR42E2	A6NKP2	422 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	BIRC5	O15392	142 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MTSS1	O43312	755 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	GCAT	O75600	419 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	TRMU	O75648	421 aa	Known RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	KRT37	O76014	449 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MMP2	P08253	660 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PSMB4	P28070	264 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PML	P29590	882 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	NTSR1	P30989	418 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	RPL22	P35268	128 aa	Known RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	NNMT	P40261	264 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CD97	P48960	835 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	COPA	P53621	1224 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	EMP3	P54852	163 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	NR1H2	P55055	460 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SLC25A3	Q00325	362 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	ITK	Q08881	620 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	FBXO43	Q4G163	708 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PID1	Q7Z2X4	250 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CACUL1	Q86Y37	369 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	KDM1B	Q8NB78	822 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	OR2AP1	Q8NGE2	309 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	ISG20	Q96AZ6	181 aa	Known RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	GABRG3	Q99928	467 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SEMA3C	Q99985	751 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CEP44	Q9C0F1	390 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	POLR1E	Q9GZS1	481 aa	Known RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	UBP1	Q9NZI7	540 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SIRPG	Q9P1W8	387 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	EVL	Q9UI08	416 aa	Predicted RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MRPS17	Q9Y2R5	130 aa	Known RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MT-CYB	P00156	380 aa	Predicted RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CTSL	P07711	333 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	METAP1	P53582	386 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	EPHB1	P54762	984 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	BTK	Q06187	659 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	TLR1	Q15399	786 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CHI3L2	Q15782	390 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	ALG1L	Q6GMV1	187 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	TMEM92	Q6UXU6	159 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	TMEM126B	Q8IUX1	230 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	WDR75	Q8IWA0	830 aa	Known RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PCDH20	Q8N6Y1	951 aa	Known RBP	11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	FNDC8	Q8TC99	324 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	GRIN3A	Q8TCU5	1115 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	GRIP2	Q9C0E4	1043 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SLC6A17	Q9H1V8	727 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	GBA3	Q9H227	469 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	GLOD4	Q9HC38	313 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PRSS16	Q9NQE7	514 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SARDH	Q9UL12	918 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PADI4	Q9UM07	663 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	AK5	Q9Y6K8	562 aa		11.81	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MEI4	A8MW99	385 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	KIT	P10721	976 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	HOXB2	P14652	356 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CD86	P42081	329 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PHEX	P78562	749 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MRPS21	P82921	87 aa	Known RBP	11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	OLIG2	Q13516	323 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	UBAP2L	Q14157	1087 aa	Known RBP	11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CNGA3	Q16281	694 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MYLK3	Q32MK0	819 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	POM121L1P	Q3SYA9	428 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CARD16	Q5EG05	197 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	DUS1L	Q6P1R4	473 aa	Known RBP	11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SLC26A11	Q86WA9	606 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	STK40	Q8N2I9	435 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	RYBP	Q8N488	228 aa	Predicted RBP	11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	METTL25	Q8N6Q8	603 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	VAT1	Q99536	393 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MKRN2	Q9H000	416 aa	Known RBP	11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	MFSD1	Q9H3U5	465 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	FAM96A	Q9H5X1	160 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	FAIM	Q9NVQ4	179 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	ITGB1BP2	Q9UKP3	347 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	APOBEC2	Q9Y235	224 aa	Known RBP	11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SIT1	Q9Y3P8	196 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	ANKRD36	A6QL64	1941 aa		11.8	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CACNA1I	Q9P0X4	2223 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	EDDM13	A0A1B0GTR0	161 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664		E9PBE3	544 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	DNAJA2	O60884	412 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SNN	O75324	88 aa	Predicted RBP	11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PIAS1	O75925	651 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	PIGN	O95427	931 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SNRPA	P09012	282 aa	Known RBP	11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	HSPA13	P48723	471 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	RAB15	P59190	212 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	LRRC32	Q14392	662 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	ANKRD22	Q5VYY1	191 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	KBTBD6	Q86V97	674 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	BBS5	Q8N3I7	341 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SMYD1	Q8NB12	490 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	SNRNP27	Q8WVK2	155 aa	Known RBP	11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CLDN23	Q96B33	292 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	CMTM5	Q96DZ9	223 aa		11.79	□□□□□ -0.52
TIMMDC1-208	ENST00000494664	IMP4	Q96G21	291 aa	Known RBP	11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms