RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 EBLN1P0CF75 366 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GOLGA6DP0CG33 693 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 ZSCAN22P10073 491 aaPredicted RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 UGT1A4P22310 534 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 MST1P26927 711 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 MMP12P39900 470 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 ARL4DP49703 201 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 MARSP56192 900 aaKnown RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 SOX8P57073 446 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CDK3Q00526 305 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CDK17Q00537 523 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GNA12Q03113 381 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CETN1Q12798 172 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 NME3Q13232 169 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CUL4BQ13620 913 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 PKP1Q13835 747 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 KEAP1Q14145 624 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 BECN1Q14457 450 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 SSPNQ14714 243 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 ACOX1Q15067 660 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 KNOP1Q1ED39 458 aaKnown RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 CFAP58Q5T655 872 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 PRAMEF17Q5VTA0 474 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 IRAK1BP1Q5VVH5 260 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 IRGCQ6NXR0 463 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 IYDQ6PHW0 289 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 LCLAT1Q6UWP7 414 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 LRRC31Q6UY01 552 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 LINC00696Q6ZRV3 163 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 UNC13DQ70J99 1090 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 MARK2Q7KZI7 788 aaKnown RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 BEND5Q7L4P6 421 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 DSELQ8IZU8 1212 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 TTC30BQ8N4P2 665 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 TAB3Q8N5C8 712 aaPredicted RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 KIAA0895Q8NCT3 520 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GOT1L1Q8NHS2 421 aaPredicted RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 SNX21Q969T3 373 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CLIP3Q96DZ5 547 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 MAGED4Q96JG8 741 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 ZNF514Q96K75 400 aaPredicted RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 SPATA32Q96LK8 384 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GDAP1L1Q96MZ0 367 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 NCAPGQ9BPX3 1015 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GPATCH1Q9BRR8 931 aaKnown RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 TRIM62Q9BVG3 475 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 TEX101Q9BY14 249 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 SCAND2PQ9GZW5 306 aaPredicted RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 CLEC4MQ9H2X3 399 aaPredicted RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 SLC24A3Q9HC58 644 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 C1GALT1Q9NS00 363 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 KBTBD4Q9NVX7 518 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 P4HTMQ9NXG6 502 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 GOLGA6AQ9NYA3 693 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 CPNE7Q9UBL6 633 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 TRPS1Q9UHF7 1281 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 SLC17A4Q9Y2C5 497 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 PADI2Q9Y2J8 665 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 ATP8A1Q9Y2Q0 1164 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 LUC7L2Q9Y383 392 aaKnown RBP5.29□□□□□ -1.56
SEC13-219ENST00000492602 SNX10Q9Y5X0 201 aa5.29□□□□□ -1.56
SEC13-219ENST00000492602 IGHV5-51A0A0C4DH38 117 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 CFAP69A5D8W1 941 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 NKX2-6A6NCS4 301 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 A8MX80 341 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 SOCS6O14544 535 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 INSIG1O15503 277 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 ATMINO43313 823 aaPredicted RBP5.28□□□□□ -1.56
SEC13-219ENST00000492602 KLRC4O43908 158 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 PRAMEF2O60811 474 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 SMC2O95347 1197 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 IGSF6O95976 241 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 CALCAP01258 141 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 UNGP13051 313 aaPredicted RBP5.28□□□□□ -1.56
SEC13-219ENST00000492602 MSX1P28360 303 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 ACVRL1P37023 503 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 CXCR3P49682 368 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 GEMIN4P57678 1058 aaKnown RBP5.28□□□□□ -1.56
SEC13-219ENST00000492602 YWHAEP62258 255 aaKnown RBP5.28□□□□□ -1.56
SEC13-219ENST00000492602 YWHAZP63104 245 aaKnown RBP5.28□□□□□ -1.56
SEC13-219ENST00000492602 KRT85P78386 507 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 NKX6-1P78426 367 aaPredicted RBP5.28□□□□□ -1.56
SEC13-219ENST00000492602 PPP3CAQ08209 521 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 RALGDSQ12967 914 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 AIMP2Q13155 320 aaKnown RBP5.28□□□□□ -1.56
SEC13-219ENST00000492602 CBLBQ13191 982 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 MTA1Q13330 715 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 STIM1Q13586 685 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 NCF4Q15080 339 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 CYP2A13Q16696 494 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 SMYD5Q6GMV2 418 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 FAM198BQ6UWH4 519 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 LIPIQ6XZB0 460 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 CERS6Q6ZMG9 384 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 ZNF783Q6ZMS7 281 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 KRTAP1-3Q8IUG1 177 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 SYTL1Q8IYJ3 562 aa5.28□□□□□ -1.56
SEC13-219ENST00000492602 EPS8L1Q8TE68 723 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms