RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 DOLKQ9UPQ8 538 aa25.56■■□□□ 1.68
TTC3-223ENST00000492275 APOBEC2Q9Y235 224 aaKnown RBP25.56■■□□□ 1.68
TTC3-223ENST00000492275 PLEKHM1Q9Y4G2 1056 aa25.56■■□□□ 1.68
TTC3-223ENST00000492275 ASXL3Q9C0F0 2248 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.55■■□□□ 1.68
TTC3-223ENST00000492275 FNTAP49354 379 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 ACADVLP49748 655 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 VPS41P49754 854 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 GPS1Q13098 491 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 OR2M4Q96R27 311 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 GPSM3Q9Y4H4 160 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 PTPRBP23467 1997 aa25.55■■□□□ 1.68
TTC3-223ENST00000492275 TCRBV7S3A2A0A539 114 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 MROH6A6NGR9 719 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 CCL22O00626 93 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 NUAK1O60285 661 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 MTX2O75431 263 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 CKMT1AP12532 417 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 ZNF8P17098 575 aaPredicted RBP25.54■■□□□ 1.68
TTC3-223ENST00000492275 ACP1P24666 158 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 AK4P27144 223 aaPredicted RBP25.54■■□□□ 1.68
TTC3-223ENST00000492275 CTBSQ01459 385 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 PEX6Q13608 980 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 MICALCLQ6ZW33 695 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 PHYKPLQ8IUZ5 450 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 ZNF398Q8TD17 642 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 SCG3Q8WXD2 468 aaKnown RBP25.54■■□□□ 1.68
TTC3-223ENST00000492275 DNAJC1Q96KC8 554 aaKnown RBP25.54■■□□□ 1.68
TTC3-223ENST00000492275 DDX47Q9H0S4 455 aaKnown RBP25.54■■□□□ 1.68
TTC3-223ENST00000492275 OR2AG1Q9H205 316 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 RMI1Q9H9A7 625 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 ZNHIT2Q9UHR6 403 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 PRKAB1Q9Y478 270 aa25.54■■□□□ 1.68
TTC3-223ENST00000492275 SRP72O76094 671 aaKnown RBP25.53■■□□□ 1.68
TTC3-223ENST00000492275 TOP3BO95985 862 aaKnown RBP25.53■■□□□ 1.68
TTC3-223ENST00000492275 PSMA3P25788 255 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 PMLP29590 882 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 DAB2P98082 770 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 ITGA9Q13797 1035 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 SEPT6Q14141 434 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 CCDC38Q502W7 563 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 SYT10Q6XYQ8 523 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 GALNT13Q8IUC8 556 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 SLC35F3Q8IY50 421 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 ADAMTS14Q8WXS8 1223 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 GSDMCQ9BYG8 508 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 SPATS2LQ9NUQ6 558 aaKnown RBP25.53■■□□□ 1.68
TTC3-223ENST00000492275 NLE1Q9NVX2 485 aaPredicted RBP25.53■■□□□ 1.68
TTC3-223ENST00000492275 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.53■■□□□ 1.68
TTC3-223ENST00000492275 APPL1Q9UKG1 709 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 GPR34Q9UPC5 381 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 WASF3Q9UPY6 502 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 PCDHGA1Q9Y5H4 931 aa25.53■■□□□ 1.68
TTC3-223ENST00000492275 RP1P56715 2156 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 PRAMEF1O95521 474 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 TPSB2P20231 275 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 CASQ1P31415 396 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 HADHAP40939 763 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 MAGEA6P43360 314 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 TERF1P54274 439 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 ILF3Q12906 894 aaKnown RBP eCLIP25.52■■□□□ 1.68
TTC3-223ENST00000492275 KCNJ11Q14654 390 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 TPSAB1Q15661 275 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 CCDC157Q569K6 752 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 OGFOD3Q6PK18 319 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 ZNF534Q76KX8 674 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 SFTPA2Q8IWL1 248 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 FAM46DQ8NEK8 389 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 GRK7Q8WTQ7 553 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 STYXQ8WUJ0 223 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 SMOXQ9NWM0 555 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 SIRPGQ9P1W8 387 aa25.52■■□□□ 1.68
TTC3-223ENST00000492275 CHUKO15111 745 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 GRID2O43424 1007 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 VEGFDO43915 354 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 GAS8O95995 478 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 TMEM115Q12893 351 aaPredicted RBP25.51■■□□□ 1.67
TTC3-223ENST00000492275 FOXC1Q12948 553 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 RAB44Q7Z6P3 723 aaPredicted RBP25.51■■□□□ 1.67
TTC3-223ENST00000492275 CDKN2AIPNLQ96HQ2 116 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 RANBP9Q96S59 729 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 ASB8Q9H765 288 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 TAAR2Q9P1P5 351 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 GULP1Q9UBP9 304 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 RNF14Q9UBS8 474 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 PCYOX1Q9UHG3 505 aa25.51■■□□□ 1.67
TTC3-223ENST00000492275 CCDC78A2IDD5 438 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 AGAP14A8MT82 685 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 GPR89AB7ZAQ6 455 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 H7C0S8 307 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 RFPL3O75679 317 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 CDK14O94921 469 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 TRIM16O95361 564 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 GPR89BP0CG08 455 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 ADRA1DP25100 572 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 PTGIRP43119 386 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 CDK16Q00536 496 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 NFATC2Q13469 925 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 NR0B2Q15466 257 aa25.5■■□□□ 1.67
TTC3-223ENST00000492275 GPRC6AQ5T6X5 926 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms