RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 ACOT1Q86TX2 421 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 ZC3H18Q86VM9 953 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CAND1Q86VP6 1230 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 C12orf40Q86WS4 652 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 LRRC6Q86X45 466 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 MCATQ8IVS2 390 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 ZZZ3Q8IYH5 903 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 HACE1Q8IYU2 909 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 KIF2BQ8N4N8 673 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TOP6BLQ8N6T0 577 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 LINC00469Q8N7U9 141 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 C12orf29Q8N999 325 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 POGLUT1Q8NBL1 392 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 GALNT6Q8NCL4 622 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CFAP61Q8NHU2 1237 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SCAMP5Q8TAC9 235 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 RAB3IL1Q8TBN0 382 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 AGAP11Q8TF27 550 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 KBTBD7Q8WVZ9 684 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 NCSTNQ92542 709 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 HDAC10Q969S8 669 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 UTP4Q969X6 686 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SDCCAG3Q96C92 435 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC7A6OSQ96CW6 309 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 MTBPQ96DY7 904 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 RAX2Q96IS3 184 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 MAML3Q96JK9 1138 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SERAC1Q96JX3 654 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SNX22Q96L94 193 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SIGLEC10Q96LC7 697 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 ZNF560Q96MR9 790 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 ANKRD27Q96NW4 1050 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CSPG4P5Q96PW8 444 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 FAM111AQ96PZ2 611 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TRAPPC9Q96Q05 1148 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 LRRC37BQ96QE4 947 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 PKP4Q99569 1192 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 EBNA1BP2Q99848 306 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SH3GL1Q99961 368 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TUBB6Q9BUF5 446 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CCDC106Q9BWC9 280 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TSSK1BQ9BXA7 367 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 GRIP2Q9C0E4 1043 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 MANSC1Q9H8J5 431 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 ZNF395Q9H8N7 513 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 HPS4Q9NQG7 708 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TBC1D23Q9NUY8 699 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 MTMR10Q9NXD2 777 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 GDAP2Q9NXN4 497 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CACNA2D2Q9NY47 1150 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TAS2R10Q9NYW0 307 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 MOCS1Q9NZB8 636 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 NDUFAF4Q9P032 175 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TUBGCP4Q9UGJ1 667 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 DPP7Q9UHL4 492 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 TEKT2Q9UIF3 430 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CBLCQ9ULV8 474 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 MTO1Q9Y2Z2 717 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 SNX9Q9Y5X1 595 aa3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 CFAP20Q9Y6A4 193 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 DICER1Q9UPY3 1922 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-206ENST00000492233 NRCAMQ92823 1304 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ANK1P16157 1881 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GOLGB1Q14789 3259 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 A0A0A0MRY4 1105 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SMIM28A0A1B0GU29 152 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 A0A1W2PNR3 127 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ARHGEF37A1IGU5 675 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 EME2A4GXA9 379 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 A8MUI8 341 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 A8MXQ7 604 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CXorf49A8MYA2 514 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 TRIM49D1C9J1S8 452 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 FAM47E-STBD1D6RA91 191 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 E7ENQ6 273 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GOLGA8RI6L899 631 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 HAS3O00219 553 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PDHXO00330 501 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PIK3R2O00459 728 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 COPEO14579 308 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 XPO1O14980 1071 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 BIRC5O15392 142 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC16A6O15403 523 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 DIAPH2O60879 1101 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 RECQL4O94761 1208 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ALDH1A2O94788 518 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 HAUS5O94927 633 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 F9P00740 461 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MT-ND5P03915 603 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 RPLP2P05387 115 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 S100A9P06702 114 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 S100A6P06703 90 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SPARCP09486 303 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CNPP09543 421 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 TPBGLP0DKB5 382 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SMIM10L2AP0DMW4 78 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SMIM10L2BP0DMW5 78 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms