RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NIPAL4Q0D2K0 466 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 C16orf72Q14CZ0 275 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 TCEAL1Q15170 157 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 QPCTQ16769 361 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 ASTE1Q2TB18 679 aaPredicted RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 ATP13A4Q4VNC1 1196 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 DCAF12Q5T6F0 453 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 CEACAM20Q6UY09 585 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 MARK2Q7KZI7 788 aaKnown RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 PLXDC1Q8IUK5 500 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 LURAP1LQ8IV03 231 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 RBM12BQ8IXT5 1001 aaKnown RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 TRAM1L1Q8N609 369 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 PLD5Q8N7P1 536 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 DTX3LQ8TDB6 740 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 BRSK1Q8TDC3 778 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 SLC37A2Q8TED4 501 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 IMP4Q96G21 291 aaKnown RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 CATSPER2Q96P56 530 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 VAT1Q99536 393 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 SPATA16Q9BXB7 569 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 ZCCHC2Q9C0B9 1178 aaKnown RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 TRIT1Q9H3H1 467 aaKnown RBP8.67□□□□□ -1.02
NUP50-217ENST00000491860 SEMA6CQ9H3T2 930 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 TRABDQ9H4I3 376 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 TRIM39Q9HCM9 518 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 ABHD10Q9NUJ1 306 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 PDP2Q9P2J9 529 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 TMEM98Q9Y2Y6 226 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.67□□□□□ -1.02
NUP50-217ENST00000491860 HEY1Q9Y5J3 304 aa8.67□□□□□ -1.02
NUP50-217ENST00000491860 PTPN13Q12923 2485 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 A0A0A6YYK5 440 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 PMS2P1A4D2B8 440 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 LILRA5A6NI73 299 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 KCNK1O00180 336 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 INPP4BO15327 924 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 TOX3O15405 576 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 PSTPIP1O43586 416 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 SPOPO43791 374 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 MFAP3LO75121 409 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 PPFIA2O75334 1257 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 SLC25A14O95258 325 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 NDST3O95803 873 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 KRT1P04264 644 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 MMP2P08253 660 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 SLC10A2Q12908 348 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 TEX44Q53QW1 395 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 KIAA1614Q5VZ46 1190 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 IYDQ6PHW0 289 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 CHST15Q7LFX5 561 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 TMC3Q7Z5M5 1100 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 RFX6Q8HWS3 928 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 VSTM4Q8IW00 320 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.66□□□□□ -1.02
NUP50-217ENST00000491860 IL22RA1Q8N6P7 574 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 RAPGEF5Q92565 580 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 GLYATL1Q969I3 302 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 KIAA1143Q96AT1 154 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 OLFM3Q96PB7 478 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 PLEKHG4BQ96PX9 1271 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 VPS35Q96QK1 796 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 NUDT22Q9BRQ3 303 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 TIMM29Q9BSF4 260 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 GPR63Q9BZJ6 419 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 FAM117AQ9C073 453 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 ADNPQ9H2P0 1102 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 NHEJ1Q9H9Q4 299 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 SLC39A1Q9NY26 324 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 HACD3Q9P035 362 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 PCDHGA4Q9Y5G9 962 aa8.66□□□□□ -1.02
NUP50-217ENST00000491860 HEMK1Q9Y5R4 338 aaPredicted RBP8.66□□□□□ -1.02
NUP50-217ENST00000491860 COL12A1Q99715 3063 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 SDK2Q58EX2 2172 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 KLHL33A6NCF5 533 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 C3orf70A6NLC5 250 aaPredicted RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 CHUKO15111 745 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 KMOO15229 486 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 CASC3O15234 703 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 MAP3K6O95382 1288 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 VIPP01282 170 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 EPOP01588 193 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 NTRK1P04629 796 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 ATP1A1P05023 1023 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 ANKRD34CP0C6C1 535 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 FGF3P11487 239 aaPredicted RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 ACP5P13686 325 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 XRCC1P18887 633 aaPredicted RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 MAP4P27816 1152 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 HMGCLP35914 325 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 ETV5P41161 510 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 HADHBP55084 474 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 MC2RQ01718 297 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 MC1RQ01726 317 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 GTF2H3Q13889 308 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms