RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 EURLQ9NYK6 297 aa21.58■■□□□ 1.04
VCPKMT-204ENST00000491402 PSMC3IPQ9P2W1 217 aaPredicted RBP21.58■■□□□ 1.04
VCPKMT-204ENST00000491402 ZNF180Q9UJW8 692 aa21.58■■□□□ 1.04
VCPKMT-204ENST00000491402 TMPRSS11EQ9UL52 423 aa21.58■■□□□ 1.04
VCPKMT-204ENST00000491402 ATP8B1O43520 1251 aa21.57■■□□□ 1.04
VCPKMT-204ENST00000491402 LATO43561 262 aa21.57■■□□□ 1.04
VCPKMT-204ENST00000491402 ASB12Q8WXK4 309 aa21.57■■□□□ 1.04
VCPKMT-204ENST00000491402 SPACA7Q96KW9 195 aa21.57■■□□□ 1.04
VCPKMT-204ENST00000491402 PRRX2Q99811 253 aa21.57■■□□□ 1.04
VCPKMT-204ENST00000491402 INTS10Q9NVR2 710 aaKnown RBP21.57■■□□□ 1.04
VCPKMT-204ENST00000491402 MUC6Q6W4X9 2439 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 SLC31A1O15431 190 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 HAUS5O94927 633 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 PCCBP05166 539 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 GPR1P46091 355 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 CSE1LP55060 971 aaKnown RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 TCF15Q12870 199 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 RASA2Q15283 850 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 IRF4Q15306 451 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 DBN1Q16643 649 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 RNF187Q5TA31 235 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 GRTP1Q5TC63 336 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 KIAA0895LQ68EN5 471 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 ZC3HC1Q86WB0 502 aaKnown RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 PLA2G15Q8NCC3 412 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 ZBTB44Q8NCP5 570 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 CENPTQ96BT3 561 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 ULK4Q96C45 1275 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 VPS35Q96QK1 796 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 KLF6Q99612 283 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 RBBP8Q99708 897 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 MBNL1Q9NR56 388 aaKnown RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 TBK1Q9UHD2 729 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 CEP192Q8TEP8 1941 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 ABCA7Q8IZY2 2146 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 PFDN6O15212 129 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 RAD51BO15315 384 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 HRO43593 1189 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 NDUFS3O75489 264 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 IGHV4-34P06331 123 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 PPARGP37231 505 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 ABCG1P45844 678 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 CD151P48509 253 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 LYPLAL1Q5VWZ2 237 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 PNCKQ6P2M8 343 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 CNSTQ6PJW8 725 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 RIBC1Q8N443 379 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 BTN2A2Q8WVV5 523 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 GLYATL1Q969I3 302 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 ATXN7L3BQ96GX2 97 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 TTC1Q99614 292 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 RHOJQ9H4E5 214 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 FZD3Q9NPG1 666 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 MBD1Q9UIS9 605 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 VPS9D1Q9Y2B5 631 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 CRYL1Q9Y2S2 319 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 SDK1Q7Z5N4 2213 aa21.56■■□□□ 1.04
VCPKMT-204ENST00000491402 PIKFYVEQ9Y2I7 2098 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 NDUFS2O75306 463 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 PYGLP06737 847 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 CCR5P51681 352 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 GPRC6AQ5T6X5 926 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 CROCCP2Q86T23 111 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 LPGAT1Q92604 370 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 CCDC97Q96F63 343 aaPredicted RBP21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 VPS39Q96JC1 886 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 LENG8Q96PV6 779 aaPredicted RBP21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 ACBD3Q9H3P7 528 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 PCDHGA2Q9Y5H1 932 aa21.55■■□□□ 1.04
VCPKMT-204ENST00000491402 INPP4BO15327 924 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 MAP3K13O43283 966 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 OR1I1O60431 355 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 FSBPO95073 299 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 SPRP35270 261 aaPredicted RBP21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 SERPINB9P50453 376 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 LIMK2P53671 638 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 TMED2Q15363 201 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 DENND6BQ8NEG7 585 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 DDHD1Q8NEL9 900 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 GDAP1Q8TB36 358 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 GAB3Q8WWW8 586 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 BIRC7Q96CA5 298 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 MYOCQ99972 504 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 BOCQ9BWV1 1114 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 ZDHHC3Q9NYG2 299 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 CNOT6Q9ULM6 557 aaKnown RBP21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 R4GN57 208 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 VPS13AQ96RL7 3174 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 USP34Q70CQ2 3546 aa21.54■■□□□ 1.04
VCPKMT-204ENST00000491402 UBA6A0AVT1 1052 aaPredicted RBP21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 SLC25A14O95258 325 aaPredicted RBP21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 ITGA2BP08514 1039 aa21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 MYZAPP0CAP1 466 aa21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 BCKDHBP21953 392 aa21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 HNRNPA2B1P22626 353 aaKnown RBP21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 PTGER3P43115 390 aa21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 INPP5AQ14642 412 aa21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 ADAMTSL4Q6UY14 1074 aa21.53■■□□□ 1.04
VCPKMT-204ENST00000491402 PHYKPLQ8IUZ5 450 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms