RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 HERPUD2Q9BSE4 406 aa11.15□□□□□ -0.62
DUBR-204ENST00000490441 SPATA16Q9BXB7 569 aa11.15□□□□□ -0.62
DUBR-204ENST00000490441 ASPSCR1Q9BZE9 553 aa11.15□□□□□ -0.62
DUBR-204ENST00000490441 XPO4Q9C0E2 1151 aaKnown RBP11.15□□□□□ -0.62
DUBR-204ENST00000490441 NENFQ9UMX5 172 aa11.15□□□□□ -0.62
DUBR-204ENST00000490441 PRKAB1Q9Y478 270 aa11.15□□□□□ -0.62
DUBR-204ENST00000490441 PCDHGA3Q9Y5H0 932 aa11.15□□□□□ -0.62
DUBR-204ENST00000490441 HEY1Q9Y5J3 304 aa11.15□□□□□ -0.62
DUBR-204ENST00000490441 SDK2Q58EX2 2172 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 SSU72P8A0A1W2PR75 194 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 EFCAB7A8K855 629 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 APOL1O14791 398 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 PPP1R12AO14974 1030 aaPredicted RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 SLC28A2O43868 658 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 SNX2O60749 519 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 DNAJC6O75061 913 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 SLC4A1P02730 911 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 TMEM253P0C7T8 217 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 SFTPCP11686 197 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 ZFXP17010 805 aaPredicted RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 PTMSP20962 102 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 MAPK9P45984 424 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 NOP2P46087 812 aaKnown RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 IFI35P80217 286 aaPredicted RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 SLC10A2Q12908 348 aaPredicted RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 NFATC3Q12968 1075 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 NFATC2Q13469 925 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 GALNT3Q14435 633 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 PDK1Q15118 436 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 SNAP47Q5SQN1 464 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 DCAF12Q5T6F0 453 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 HENMT1Q5T8I9 393 aaKnown RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 LYSMD3Q7Z3D4 306 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 PRICKLE2Q7Z3G6 844 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 DDA1Q9BW61 102 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 ZFYVE1Q9HBF4 777 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 SARS2Q9NP81 518 aaKnown RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 RAD18Q9NS91 495 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 SLC39A1Q9NY26 324 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 TMEM9Q9P0T7 183 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 KCNK6Q9Y257 313 aa11.14□□□□□ -0.63
DUBR-204ENST00000490441 OAS3Q9Y6K5 1087 aaKnown RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 SETXQ7Z333 2677 aaKnown RBP11.14□□□□□ -0.63
DUBR-204ENST00000490441 KIR2DS5A0A0G2JLQ3 304 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 A0A0G2JNG1 304 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 OR5K4A6NMS3 321 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 FADS2P1A8MWK0 482 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 ZNF487B1APH4 448 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 B4E171 279 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 KIR2DS3K7RE56 304 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 GRID2O43424 1007 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 MTA2O94776 668 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 KRT1P04264 644 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 MMP2P08253 660 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 TSPAN7P41732 249 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 ARHGAP25P42331 645 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 EPHA4P54764 986 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 ZBTB17Q13105 803 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 KIR2DS5Q14953 304 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 LINC00303Q3SY05 128 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.13□□□□□ -0.63
DUBR-204ENST00000490441 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 CCDC70Q6NSX1 233 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 IYDQ6PHW0 289 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 WDR74Q6RFH5 385 aaPredicted RBP11.13□□□□□ -0.63
DUBR-204ENST00000490441 KDELC2Q7Z4H8 507 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 NT5DC3Q86UY8 548 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 VSIG1Q86XK7 387 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 RFX6Q8HWS3 928 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 RHOT2Q8IXI1 618 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 CACNA2D3Q8IZS8 1091 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 PLD5Q8N7P1 536 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 SLC35G2Q8TBE7 412 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 NCSTNQ92542 709 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 CCDC42Q96M95 316 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 AGAP3Q96P47 875 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 TEFMQ96QE5 360 aaKnown RBP11.13□□□□□ -0.63
DUBR-204ENST00000490441 DNAJC7Q99615 494 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 ZSCAN5AQ9BUG6 496 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 CEP41Q9BYV8 373 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 GPR63Q9BZJ6 419 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 CARD9Q9H257 536 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 OSGEPL1Q9H4B0 414 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 EPB41L1Q9H4G0 881 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 TBC1D29Q9UFV1 150 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 CNOT6Q9ULM6 557 aaKnown RBP11.13□□□□□ -0.63
DUBR-204ENST00000490441 SHOC2Q9UQ13 582 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 B3GALT1Q9Y5Z6 326 aa11.13□□□□□ -0.63
DUBR-204ENST00000490441 A8MU76 341 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 GPR89AB7ZAQ6 455 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 NUAK1O60285 661 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 RAD1O60671 282 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 SLC25A14O95258 325 aaPredicted RBP11.12□□□□□ -0.63
DUBR-204ENST00000490441 EML2O95834 649 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 FAM87AP0C7U9 286 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 GPR89BP0CG08 455 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 F3P13726 295 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 TNNT1P13805 278 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 UGT1A3P35503 534 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms