RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 TMPRSS11EQ9UL52 423 aa12.31□□□□□ -0.44
FARP1-207ENST00000490389 PNMA8BQ9ULN7 279 aaPredicted RBP12.31□□□□□ -0.44
FARP1-207ENST00000490389 PRKAB1Q9Y478 270 aa12.31□□□□□ -0.44
FARP1-207ENST00000490389 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 PRSS38A1L453 326 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 SMAPO00193 183 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 NDC80O14777 642 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 DFNA5O60443 496 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 GOT2P00505 430 aaKnown RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 TNFP01375 233 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 CSF2P04141 144 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 CEACAM5P06731 702 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 CTSEP14091 401 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 EPHA8P29322 1005 aaPredicted RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 CA5AP35218 305 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 CDKN1CP49918 316 aaPredicted RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 PLTPP55058 493 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 ARL4CP56559 192 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 HNRNPKP61978 463 aaKnown RBP eCLIP12.3□□□□□ -0.44
FARP1-207ENST00000490389 DHX9Q08211 1270 aaKnown RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 NFATC2Q13469 925 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 SHBQ15464 509 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 TRADDQ15628 312 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 HIF1AQ16665 826 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 MSS51Q4VC12 460 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 GPRC6AQ5T6X5 926 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 SNX20Q7Z614 316 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 LRRN4CLQ8ND94 238 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 LMX1AQ8TE12 382 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 ZNF669Q96BR6 464 aaPredicted RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 STAMBPL1Q96FJ0 436 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 COX14Q96I36 57 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 TTC25Q96NG3 672 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 KIFC1Q9BW19 673 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 FRMD8Q9BZ67 464 aaPredicted RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 DNAAF2Q9NVR5 837 aaKnown RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 WHRNQ9P202 907 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 ZNHIT2Q9UHR6 403 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 SUFUQ9UMX1 484 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 SOX13Q9UN79 622 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 GPSM3Q9Y4H4 160 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 CEP192Q8TEP8 1941 aa12.3□□□□□ -0.44
FARP1-207ENST00000490389 RIF1Q5UIP0 2472 aaKnown RBP12.3□□□□□ -0.44
FARP1-207ENST00000490389 TNFRSF10CO14798 259 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 YKT6O15498 198 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 FFAR2O15552 330 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 MSH3P20585 1137 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 MAGEA3P43357 314 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 RXRGP48443 463 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 BLKP51451 505 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 HK3P52790 923 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 CACNG1Q06432 222 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 GTF2H3Q13889 308 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 KHDC1Q4VXA5 237 aaKnown RBP12.29□□□□□ -0.44
FARP1-207ENST00000490389 LDLRAP1Q5SW96 308 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 AFTPHQ6ULP2 937 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 CRTC3Q6UUV7 619 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 DET1Q7L5Y6 550 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 AGGF1Q8N302 714 aaeCLIP12.29□□□□□ -0.44
FARP1-207ENST00000490389 PNPLA1Q8N8W4 532 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 ZNF548Q8NEK5 533 aaPredicted RBP12.29□□□□□ -0.44
FARP1-207ENST00000490389 NETO1Q8TDF5 533 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 SETD7Q8WTS6 366 aaKnown RBP12.29□□□□□ -0.44
FARP1-207ENST00000490389 NAT14Q8WUY8 206 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.29□□□□□ -0.44
FARP1-207ENST00000490389 ULK4Q96C45 1275 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 CFAP36Q96G28 342 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 DCUN1D1Q96GG9 259 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 SIGLEC10Q96LC7 697 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 VPS35Q96QK1 796 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 LRRC61Q9BV99 259 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 MRM3Q9HC36 420 aaKnown RBP12.29□□□□□ -0.44
FARP1-207ENST00000490389 EPB41L5Q9HCM4 733 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 TRIM39Q9HCM9 518 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 UCKL1Q9NWZ5 548 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 GRHL1Q9NZI5 618 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 ATXN10Q9UBB4 475 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 SPASTQ9UBP0 616 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 DMGDHQ9UI17 866 aaKnown RBP12.29□□□□□ -0.44
FARP1-207ENST00000490389 RIMKLBQ9ULI2 386 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 CHMP2BQ9UQN3 213 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 SLC17A4Q9Y2C5 497 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 RPS6KL1Q9Y6S9 549 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 DOCK9Q9BZ29 2069 aa12.29□□□□□ -0.44
FARP1-207ENST00000490389 WDR87Q6ZQQ6 2873 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
FARP1-207ENST00000490389 MAGEB16A2A368 324 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 GOLGA8KD6RF30 607 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 GOLGA8TH3BQL2 631 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 H7C0S8 307 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 TP73O15350 636 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 PIAS2O75928 621 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 CDK14O94921 469 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 VAPBO95292 243 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 FUCA1P04066 466 aa12.28□□□□□ -0.44
FARP1-207ENST00000490389 CELA2BP08218 269 aaPredicted RBP12.28□□□□□ -0.44
FARP1-207ENST00000490389 RHOXF2BP0C7M4 288 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms