RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MIF4GDA9UHW6 222 aaKnown RBP17.28■□□□□ 0.36
SEC13-218ENST00000490283 CASC3O15234 703 aaKnown RBP17.28■□□□□ 0.36
SEC13-218ENST00000490283 GRID2O43424 1007 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 DNAJC6O75061 913 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 TNFSF15O95150 251 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 CPNE6O95741 557 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 JMJD7P0C870 316 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 ACP5P13686 325 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 GEMP55040 296 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 PHF19Q5T6S3 580 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 DARS2Q6PI48 645 aaKnown RBP17.28■□□□□ 0.36
SEC13-218ENST00000490283 KDELC1Q6UW63 502 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 GLT6D1Q7Z4J2 308 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 ZNF438Q7Z4V0 828 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 LRRC57Q8N9N7 239 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 KCNE4Q8WWG9 221 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 PATE1Q8WXA2 126 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 GLYATL1Q969I3 302 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 EID2BQ96D98 161 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 NAF1Q96HR8 494 aaKnown RBP17.28■□□□□ 0.36
SEC13-218ENST00000490283 PPP1R2P1Q96PQ5 205 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 PLEKHG4BQ96PX9 1271 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 GBA3Q9H227 469 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 TRIM39Q9HCM9 518 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 ASCL3Q9NQ33 180 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.28■□□□□ 0.36
SEC13-218ENST00000490283 ATXN7L1Q9ULK2 861 aaPredicted RBP17.28■□□□□ 0.36
SEC13-218ENST00000490283 PRKAB1Q9Y478 270 aa17.28■□□□□ 0.36
SEC13-218ENST00000490283 NUAK1O60285 661 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 ITGA2BP08514 1039 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 RBP3P10745 1247 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 BPIP17213 487 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 ITPKBP27987 946 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 HMGCLP35914 325 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 OR1D5P58170 312 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 B4GALNT1Q00973 533 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 NR1D2Q14995 579 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 SLC1A5Q15758 541 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 SIRPB2Q5JXA9 342 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 AVL9Q8NBF6 648 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 TTC13Q8NBP0 860 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 GDAP1Q8TB36 358 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 BLOC1S5Q8TDH9 187 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 AHCYL2Q96HN2 611 aaKnown RBP17.27■□□□□ 0.36
SEC13-218ENST00000490283 OXNAD1Q96HP4 312 aaPredicted RBP17.27■□□□□ 0.36
SEC13-218ENST00000490283 MRGPRX2Q96LB1 330 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 CMKLR1Q99788 373 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 HERPUD2Q9BSE4 406 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 KCNK4Q9NYG8 393 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 ATXN10Q9UBB4 475 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 KCNK6Q9Y257 313 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 AAR2Q9Y312 384 aaKnown RBP17.27■□□□□ 0.36
SEC13-218ENST00000490283 PKP3Q9Y446 797 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 SPO11Q9Y5K1 396 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 ST14Q9Y5Y6 855 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 RP1P56715 2156 aa17.27■□□□□ 0.36
SEC13-218ENST00000490283 WDFY3Q8IZQ1 3526 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 KCNN4O15554 427 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 VEGFDO43915 354 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 UGT1A5P35504 534 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 UCNP55089 124 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 GSDMDP57764 484 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 GTF2H3Q13889 308 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 SLC9B2Q86UD5 537 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 JAMLQ86YT9 394 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 TMEM139Q8IV31 216 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 SPACA3Q8IXA5 215 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 ALG3Q92685 438 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 SH3KBP1Q96B97 665 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 SLC38A3Q99624 504 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 DPYSL5Q9BPU6 564 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 DPH1Q9BZG8 443 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 OSGEPL1Q9H4B0 414 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 RDH14Q9HBH5 336 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 BPIFA1Q9NP55 256 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 ARFGAP3Q9NP61 516 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.26■□□□□ 0.35
SEC13-218ENST00000490283 LOXL2Q9Y4K0 774 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 ZZEF1O43149 2961 aa17.26■□□□□ 0.35
SEC13-218ENST00000490283 TRBV23OR9-2A0A075B6M9 112 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 A0A1W2PNU3 283 aaPredicted RBP17.25■□□□□ 0.35
SEC13-218ENST00000490283 OR5K4A6NMS3 321 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 AURKAO14965 403 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 KMOO15229 486 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 B4GAT1O43505 415 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 SNX2O60749 519 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 PPFIA2O75334 1257 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 PYGMP11217 842 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 ZNF8P17098 575 aaPredicted RBP17.25■□□□□ 0.35
SEC13-218ENST00000490283 SPAM1P38567 509 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 CHRNA4P43681 627 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 FASLGP48023 281 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 GPLD1P80108 840 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 HHEXQ03014 270 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 TLE3Q04726 772 aa17.25■□□□□ 0.35
SEC13-218ENST00000490283 ZFP36L1Q07352 338 aaKnown RBP17.25■□□□□ 0.35
SEC13-218ENST00000490283 INSCQ1MX18 579 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms