RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DLG1Q12959 904 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 TOMM20Q15388 145 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 MYLK3Q32MK0 819 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 NSUN5P2Q63ZY6 315 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 C18orf63Q68DL7 685 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 LCN10Q6JVE6 187 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 PAPD4Q6PIY7 484 aaKnown RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 BRAT1Q6PJG6 821 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 C16orf54Q6UWD8 224 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 CCDC190Q86UF4 302 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 GPR180Q86V85 440 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 ARID3BQ8IVW6 561 aaPredicted RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 ZNF34Q8IZ26 560 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 SCYL3Q8IZE3 742 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 POC5Q8NA72 575 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 HMGCLL1Q8TB92 370 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 THAP6Q8TBB0 222 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 DNAAF4Q8WXU2 420 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 NAF1Q96HR8 494 aaKnown RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 ADGRG7Q96K78 797 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 ZNF385AQ96PM9 386 aaKnown RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 MXD3Q9BW11 206 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 TEX12Q9BXU0 123 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 FBXL2Q9UKC9 423 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 KLHL20Q9Y2M5 609 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 AMDHD2Q9Y303 409 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 RABGAP1Q9Y3P9 1069 aa3.88□□□□□ -1.79
CD46-216ENST00000490278 ZNF644Q9H582 1327 aaPredicted RBP3.88□□□□□ -1.79
CD46-216ENST00000490278 FAM90A26D6RGX4 464 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 ANKRD28O15084 1053 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 TMCC2O75069 709 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 ENTPD3O75355 529 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 PAPSS2O95340 614 aaPredicted RBP3.87□□□□□ -1.79
CD46-216ENST00000490278 TUBBP07437 444 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 S1PR1P21453 382 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 SAT1P21673 171 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 UGT1A1P22309 533 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 TNFRSF8P28908 595 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 TMPOP42166 694 aaKnown RBP3.87□□□□□ -1.79
CD46-216ENST00000490278 NRIP1P48552 1158 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 BRWD1-AS2P59051 145 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 KCNC3Q14003 757 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 SLC39A14Q15043 492 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 SF3B4Q15427 424 aaKnown RBP eCLIP3.87□□□□□ -1.792e-25■■■■■ 60.3
CD46-216ENST00000490278 CFAP58Q5T655 872 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 NADSYN1Q6IA69 706 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 ENOSF1Q7L5Y1 443 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 MCEMP1Q8IX19 187 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 RASGEF1CQ8N431 466 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 SMRP1Q8NCR6 262 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 SPATA22Q8NHS9 363 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 NUDCD2Q8WVJ2 157 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 LRRC59Q96AG4 307 aaKnown RBP3.87□□□□□ -1.79
CD46-216ENST00000490278 TMEM19Q96HH6 336 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 QRFPRQ96P65 431 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 MEIS3Q99687 375 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 GAREM1Q9H706 876 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 CD93Q9NPY3 652 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 PAG1Q9NWQ8 432 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 DBNLQ9UJU6 430 aaKnown RBP3.87□□□□□ -1.79
CD46-216ENST00000490278 RPS6KA6Q9UK32 745 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 PADI3Q9ULW8 664 aa3.87□□□□□ -1.79
CD46-216ENST00000490278 A0A1W2PR77 199 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 OR2A25A4D2G3 310 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PAPSS1O43252 624 aaPredicted RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 PLPP2O43688 288 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 SLC28A2O43868 658 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PGM3O95394 542 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 ZBTB11O95625 1053 aaPredicted RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 AFPP02771 609 aaKnown RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 SELLP14151 372 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PLA2G2AP14555 144 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 CORO1AP31146 461 aaKnown RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 RAD52P43351 418 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 MMP14P50281 582 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 ART1P52961 327 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 CLDN20P56880 219 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PSMC6P62333 389 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 SPOCK1Q08629 439 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 SNTA1Q13424 505 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 KEAP1Q14145 624 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PCLAFQ15004 111 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 NTRK2Q16620 822 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 KIF19Q2TAC6 998 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 KRTCAP3Q53RY4 240 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 TRNP1Q6NT89 227 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 ZNF517Q6ZMY9 492 aaPredicted RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 RNF113BQ8IZP6 322 aaKnown RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 EMC1Q8N766 993 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 CCDC89Q8N998 374 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 IL17RCQ8NAC3 791 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 ACVR1CQ8NER5 493 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 OR5R1Q8NH85 324 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 LILRB1Q8NHL6 650 aaPredicted RBP3.86□□□□□ -1.79
CD46-216ENST00000490278 GSDMBQ8TAX9 411 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 DUSP19Q8WTR2 217 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 BICD1Q96G01 975 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 PCYT2Q99447 389 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 SEMA3CQ99985 751 aa3.86□□□□□ -1.79
CD46-216ENST00000490278 OSGEPL1Q9H4B0 414 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms