RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 RALGPS1Q5JS13 557 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 TCTN3Q6NUS6 607 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 C6orf15Q6UXA7 325 aaPredicted RBP10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 POLNQ7Z5Q5 900 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 SLC9B2Q86UD5 537 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 NLRP8Q86W28 1048 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 CCDC13Q8IYE1 715 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 NDUFAF2Q8N183 169 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 HERPUD2Q9BSE4 406 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 ARFGAP3Q9NP61 516 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 PRDM8Q9NQV8 689 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 VPS18Q9P253 973 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 CPNE7Q9UBL6 633 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 LIMA1Q9UHB6 759 aaKnown RBP10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 TLK1Q9UKI8 766 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 CHKBQ9Y259 395 aa10.68□□□□□ -0.7
PTP4A2-206ENST00000489313 MED13Q9UHV7 2174 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 CDC14CA4D256 554 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 FADS2P1A8MWK0 482 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 PDGFAP04085 211 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 DSC2Q02487 901 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 TXNRD3NBQ6F5E7 133 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 LYSMD3Q7Z3D4 306 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 PLXDC1Q8IUK5 500 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 TEX26Q8N6G2 289 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 C9orf72Q96LT7 481 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 TGM7Q96PF1 710 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 OR6C1Q96RD1 312 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 ERGIC2Q96RQ1 377 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 WDR24Q96S15 920 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 OGFRQ9NZT2 677 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 PLEKHB1Q9UF11 243 aaPredicted RBP10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 POLHQ9Y253 713 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 SHANK1Q9Y566 2161 aa10.67□□□□□ -0.7
PTP4A2-206ENST00000489313 KIR2DS5A0A0G2JLQ3 304 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 A0A0G2JNG1 304 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 KIR2DS3K7RE56 304 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 RFPL1O75677 317 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 DNAJB5O75953 348 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 KIAA0754O94854 1291 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 AGFG2O95081 481 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 FTLP02792 175 aaPredicted RBP10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 ANKRD34CP0C6C1 535 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 CCDC172P0C7W6 258 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 RARAP10276 462 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 SLC2A4P14672 509 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 GNLYP22749 145 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 UBE2IP63279 158 aaKnown RBP10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 KIR2DS5Q14953 304 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 ZNF648Q5T619 568 aaPredicted RBP10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 PPP1R2P3Q6NXS1 205 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 PHYKPLQ8IUZ5 450 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 RASGRP3Q8IV61 690 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 ANKRD20A12PQ8NF67 263 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 STAMBPL1Q96FJ0 436 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 PLEKHG4BQ96PX9 1271 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 POLR1EQ9GZS1 481 aaKnown RBP10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 TWSG1Q9GZX9 223 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 OSGEPL1Q9H4B0 414 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 EPB41L1Q9H4G0 881 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 PCDH18Q9HCL0 1135 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 SCHIP1Q9P0W5 487 aaPredicted RBP10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 MYO1AQ9UBC5 1043 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 LNPEPQ9UIQ6 1025 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 TTLL3Q9Y4R7 772 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 SLC30A1Q9Y6M5 507 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 TACC2O95359 2948 aa10.66□□□□□ -0.7
PTP4A2-206ENST00000489313 CSMD1Q96PZ7 3565 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 C1orf232A0A0U1RR37 186 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 PIPSLA2A3N6 862 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 LILRA5A6NI73 299 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 GRID2O43424 1007 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 KIF1CO43896 1103 aaKnown RBP10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 VPS4BO75351 444 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 RASSF9O75901 435 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 UBXN7O94888 489 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 NDUFA10O95299 355 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 PRLP01236 227 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 C9P02748 559 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 ATP1A3P13637 1013 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 SERPINB6P35237 376 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 PCK1P35558 622 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 LEPRP48357 1165 aaKnown RBP10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 PMS2P54278 862 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 HENMT1Q5T8I9 393 aaKnown RBP10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 CAPRIN2Q6IMN6 1127 aaKnown RBP10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 APTXQ7Z2E3 356 aaKnown RBP10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 LPCAT1Q8NF37 534 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 TDRD1Q9BXT4 1180 aaKnown RBP10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 KLC4Q9NSK0 619 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 ATXN10Q9UBB4 475 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 VPS4AQ9UN37 437 aa10.65□□□□□ -0.7
PTP4A2-206ENST00000489313 OR5K4A6NMS3 321 aa10.65□□□□□ -0.71
PTP4A2-206ENST00000489313 TTLL8A6PVC2 850 aa10.65□□□□□ -0.71
PTP4A2-206ENST00000489313 MFSD11O43934 449 aa10.65□□□□□ -0.71
PTP4A2-206ENST00000489313 NUAK1O60285 661 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms