RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MT-ND3P03897 115 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 PDHA1P08559 390 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 SLC2A4P14672 509 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 AMD1P17707 334 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 ELAVL4P26378 380 aaKnown RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 HSPA9P38646 679 aaKnown RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 KLK7P49862 253 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 POLR2FP61218 127 aaKnown RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 RPS18P62269 152 aaKnown RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 UGT8Q16880 541 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 PAPD7Q5XG87 772 aaKnown RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 JMJD6Q6NYC1 403 aaPredicted RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 FAM199XQ6PEV8 388 aaPredicted RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 DCUN1D2Q6PH85 259 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 ZNF765Q7L2R6 523 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 Q8NA96 180 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 THAP4Q8WY91 577 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 PLEKHG4BQ96PX9 1271 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 SNRNP25Q9BV90 132 aaKnown RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 MFRPQ9BY79 579 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 ING2Q9H160 280 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 ZNF768Q9H5H4 540 aaKnown RBP15.98■□□□□ 0.15
USP48-210ENST00000489108 NLRC4Q9NPP4 1024 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 ACSS2Q9NR19 701 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 VPS18Q9P253 973 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 PCSK1NQ9UHG2 260 aa15.98■□□□□ 0.15
USP48-210ENST00000489108 C21orf140B9A014 251 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 TOX3O15405 576 aaPredicted RBP15.97■□□□□ 0.15
USP48-210ENST00000489108 RASSF9O75901 435 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 UBXN7O94888 489 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 TIAF1O95411 115 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 PYGLP06737 847 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 JAM2P57087 298 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 UBE2IP63279 158 aaKnown RBP15.97■□□□□ 0.15
USP48-210ENST00000489108 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.97■□□□□ 0.15
USP48-210ENST00000489108 PPP6R3Q5H9R7 873 aaPredicted RBP15.97■□□□□ 0.15
USP48-210ENST00000489108 TMEM26Q6ZUK4 368 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 PPP1R3BQ86XI6 285 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 ARFGAP1Q8N6T3 406 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 PEBP4Q96S96 227 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 MGME1Q9BQP7 344 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 SLC29A3Q9BZD2 475 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 SLAMF7Q9NQ25 335 aa15.97■□□□□ 0.15
USP48-210ENST00000489108 SEPT11Q9NVA2 429 aaKnown RBP15.97■□□□□ 0.15
USP48-210ENST00000489108 SCHIP1Q9P0W5 487 aaPredicted RBP15.97■□□□□ 0.15
USP48-210ENST00000489108 EIF3CLB5ME19 914 aaKnown RBP15.96■□□□□ 0.15
USP48-210ENST00000489108 EPHB6O15197 1021 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 XRCC1P18887 633 aaPredicted RBP15.96■□□□□ 0.15
USP48-210ENST00000489108 PTPN4P29074 926 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 STC1P52823 247 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 CACHD1Q5VU97 1274 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 KLHL6Q8WZ60 621 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 SEC14L1Q92503 715 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 C19orf60Q96EN9 201 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 WDR24Q96S15 920 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 EIF3CQ99613 913 aaKnown RBP15.96■□□□□ 0.15
USP48-210ENST00000489108 GPR87Q9BY21 358 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 BRD8Q9H0E9 1235 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 UCK1Q9HA47 277 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 CWC15Q9P013 229 aaKnown RBP15.96■□□□□ 0.15
USP48-210ENST00000489108 ZNF451Q9Y4E5 1061 aa15.96■□□□□ 0.15
USP48-210ENST00000489108 GRID2O43424 1007 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 KRT86O43790 486 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 FZD6O60353 706 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 LRCH4O75427 683 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 VIPP01282 170 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 DESP17661 470 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 SLC19A1P41440 591 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 NR6A1Q15406 480 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 CHRNA6Q15825 494 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 RALGPS1Q5JS13 557 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 AVL9Q8NBF6 648 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 RMI1Q9H9A7 625 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 FAM207AQ9NSI2 230 aaPredicted RBP15.95■□□□□ 0.14
USP48-210ENST00000489108 SAMSN1Q9NSI8 373 aaKnown RBP15.95■□□□□ 0.14
USP48-210ENST00000489108 ZNF624Q9P2J8 865 aaPredicted RBP15.95■□□□□ 0.14
USP48-210ENST00000489108 FBN2P35556 2912 aa15.95■□□□□ 0.14
USP48-210ENST00000489108 A0A0J9YYE9 177 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 FADS2P1A8MWK0 482 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 NUAK1O60285 661 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 MAFKO60675 156 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 DPM1O60762 260 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 CLDN7O95471 211 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 TRBC1P01850 177 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 ZNF30P17039 623 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 PSMA2P25787 234 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 HCAR3P49019 387 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 RIPPLY3P57055 190 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 RPS15P62841 145 aaKnown RBP15.94■□□□□ 0.14
USP48-210ENST00000489108 IL10RAQ13651 578 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 LAMB3Q13751 1172 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 DPYSQ14117 519 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 SLC6A19Q695T7 634 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 PWWP2BQ6NUJ5 590 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 FAM92BQ6ZTR7 304 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 PRSS42Q7Z5A4 293 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 SYVN1Q86TM6 617 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 PHYKPLQ8IUZ5 450 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms