RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 LMBRD1Q9NUN5 540 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 PKD2L2Q9NZM6 624 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 KCNMB2Q9Y691 235 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 NBASA2RRP1 2371 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 MKRN2OSH3BPM6 223 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 MATN3O15232 486 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 GRID2O43424 1007 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 CLDN7O95471 211 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 SPINT3P49223 89 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 CLCNKAP51800 687 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 DSC2Q02487 901 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 KLHL30Q0D2K2 578 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 CCDC122Q5T0U0 273 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 CCHCR1Q8TD31 782 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 MIB2Q96AX9 1013 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 PCDH9Q9HC56 1237 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 PLAAQ9Y263 795 aa18.83■□□□□ 0.61
GGPS1-206ENST00000488594 C1orf232A0A0U1RR37 186 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 GPR89AB7ZAQ6 455 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 NUAK1O60285 661 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 PRLP01236 227 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 C9P02748 559 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 GPR89BP0CG08 455 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 CD97P48960 835 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 UBE2IP63279 158 aaKnown RBP18.82■□□□□ 0.6
GGPS1-206ENST00000488594 SLC25A11Q02978 314 aaKnown RBP18.82■□□□□ 0.6
GGPS1-206ENST00000488594 FOXM1Q08050 763 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 IL11RAQ14626 422 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 ANKRD20A8PQ5CZ79 823 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 ATP1A1-AS1Q5TC04 95 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 TXNRD3NBQ6F5E7 133 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 TCTN3Q6NUS6 607 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 C6orf15Q6UXA7 325 aaPredicted RBP18.82■□□□□ 0.6
GGPS1-206ENST00000488594 CLEC17AQ6ZS10 378 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 AOPEPQ8N6M6 819 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 TEX19Q8NA77 164 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 LPCAT1Q8NF37 534 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 C9orf72Q96LT7 481 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 PSMG3-AS1Q96PY0 264 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 WDR24Q96S15 920 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 TBC1D10AQ9BXI6 508 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
GGPS1-206ENST00000488594 RBM22Q9NW64 420 aaKnown RBP eCLIP18.82■□□□□ 0.6
GGPS1-206ENST00000488594 IP6K2Q9UHH9 426 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 TP53TG5Q9Y2B4 290 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 TTLL3Q9Y4R7 772 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 RELNP78509 3460 aa18.82■□□□□ 0.6
GGPS1-206ENST00000488594 FADS2P1A8MWK0 482 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 IL4RP24394 825 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 CCNCP24863 283 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 DLSTP36957 453 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 IHHQ14623 411 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 IFI16Q16666 785 aaKnown RBP18.81■□□□□ 0.6
GGPS1-206ENST00000488594 LURAP1LQ8IV03 231 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.81■□□□□ 0.6
GGPS1-206ENST00000488594 ARRDC2Q8TBH0 407 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 FAM71BQ8TC56 605 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 TSGA13Q96PP4 275 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 PLEKHG4BQ96PX9 1271 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 KCND3Q9UK17 655 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 POLHQ9Y253 713 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 MFSD11O43934 449 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 XRCC1P18887 633 aaPredicted RBP18.81■□□□□ 0.6
GGPS1-206ENST00000488594 PAFAH1B3Q15102 231 aaKnown RBP18.81■□□□□ 0.6
GGPS1-206ENST00000488594 E4F1Q66K89 784 aaPredicted RBP18.81■□□□□ 0.6
GGPS1-206ENST00000488594 TMEM26Q6ZUK4 368 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 CCDC13Q8IYE1 715 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 STAMBPL1Q96FJ0 436 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 PRDM8Q9NQV8 689 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 ATXN10Q9UBB4 475 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 CROTQ9UKG9 612 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 ADGRG1Q9Y653 693 aa18.81■□□□□ 0.6
GGPS1-206ENST00000488594 MRPS18BQ9Y676 258 aaKnown RBP18.81■□□□□ 0.6
GGPS1-206ENST00000488594 ANKRD66B4E2M5 251 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 MTA2O94776 668 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 UBXN7O94888 489 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 RECKO95980 971 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 VIPP01282 170 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 ZNF28P17035 718 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 F8A1P23610 371 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 GFERP55789 205 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 MMRN1Q13201 1228 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 HADHQ16836 314 aaKnown RBP18.8■□□□□ 0.6
GGPS1-206ENST00000488594 FILIP1LQ4L180 1135 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 NCBP2-AS2Q69YL0 99 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 CYB5D1Q6P9G0 228 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 TRIM48Q8IWZ4 208 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 MLPHQ9BV36 600 aaPredicted RBP18.8■□□□□ 0.6
GGPS1-206ENST00000488594 ADGRE3Q9BY15 652 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 OSGEPL1Q9H4B0 414 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 ZNF768Q9H5H4 540 aaKnown RBP18.8■□□□□ 0.6
GGPS1-206ENST00000488594 TRIM39Q9HCM9 518 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 OGFRQ9NZT2 677 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 ANAPC7Q9UJX3 599 aa18.8■□□□□ 0.6
GGPS1-206ENST00000488594 GOLGA6L3A6NEY3 463 aa18.79■□□□□ 0.6
GGPS1-206ENST00000488594 MTSS1O43312 755 aa18.79■□□□□ 0.6
GGPS1-206ENST00000488594 RFPL1O75677 317 aa18.79■□□□□ 0.6
GGPS1-206ENST00000488594 NDUFA10O95299 355 aa18.79■□□□□ 0.6
GGPS1-206ENST00000488594 ZNF8P17098 575 aaPredicted RBP18.79■□□□□ 0.6
GGPS1-206ENST00000488594 AMD1P17707 334 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms