RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 FAM26EQ8N5C1 309 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 PCDH20Q8N6Y1 951 aaKnown RBP5.97□□□□□ -1.45
CDHR3-213ENST00000488386 NPWQ8N729 165 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 RTL3Q8N8U3 475 aaKnown RBP5.97□□□□□ -1.45
CDHR3-213ENST00000488386 PCDH19Q8TAB3 1148 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 SAP25Q8TEE9 199 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 ADAMTS14Q8WXS8 1223 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 ZCCHC14Q8WYQ9 949 aaKnown RBP5.97□□□□□ -1.45
CDHR3-213ENST00000488386 ARHGEF26Q96DR7 871 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 CNDP2Q96KP4 475 aaKnown RBP5.97□□□□□ -1.45
CDHR3-213ENST00000488386 SIGLEC10Q96LC7 697 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 BMFQ96LC9 184 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 CCDC114Q96M63 670 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 NSMCE3Q96MG7 304 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.97□□□□□ -1.454e-7■■■■■ 29.7
CDHR3-213ENST00000488386 WRAP53Q9BUR4 548 aaKnown RBP5.97□□□□□ -1.45
CDHR3-213ENST00000488386 ZWILCHQ9H900 591 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 GDF3Q9NR23 364 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 ETNK2Q9NVF9 386 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 IFNKQ9P0W0 207 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 LHX3Q9UBR4 397 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 FTSJ1Q9UET6 329 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 DAAM1Q9Y4D1 1078 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 NEUROG3Q9Y4Z2 214 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 FADS3Q9Y5Q0 445 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 TPRP12270 2363 aaKnown RBP5.97□□□□□ -1.45
CDHR3-213ENST00000488386 MYLKQ15746 1914 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 SHROOM3Q8TF72 1996 aa5.97□□□□□ -1.45
CDHR3-213ENST00000488386 TCRBV5S2A0A599 114 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 ANKRD62A6NC57 917 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 TMEM191CA6NGB0 347 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 SRRM3A6NNA2 597 aaPredicted RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 A8MX80 341 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PRAMEF26H0Y7S4 382 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 DFFAO00273 331 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 TRIM38O00635 465 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 NEMP1O14524 444 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PCDHGA12O60330 932 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 LRCH4O75427 683 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 NEBLO76041 1014 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 ASMTLO95671 621 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 LDOC1O95751 146 aaPredicted RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 C8BP07358 591 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 ERCC2P18074 760 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 HNRNPA2B1P22626 353 aaKnown RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 GJC1P36383 396 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PBX1P40424 430 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 GRK6P43250 576 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PAPOLAP51003 745 aaKnown RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 UBASH3AP57075 661 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 SNRPD1P62314 119 aaKnown RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 SLC9A5Q14940 896 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 KLHL40Q2TBA0 621 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 MYLK3Q32MK0 819 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 ZSCAN23Q3MJ62 389 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 SLC45A4Q5BKX6 768 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 C19orf48Q6RUI8 117 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 CRTC1Q6UUV9 634 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 ZNF783Q6ZMS7 281 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 Q6ZSR6 202 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 KANSL1Q7Z3B3 1105 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 GLRX5Q86SX6 157 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 VPS36Q86VN1 386 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 C1QL4Q86Z23 238 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 RBFAQ8N0V3 343 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 SLC25A45Q8N413 288 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 OR2AP1Q8NGE2 309 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 HSPH1Q92598 858 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PPP1R16AQ96I34 528 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 CNPY3Q9BT09 278 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 SLC17A9Q9BYT1 436 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 THAP2Q9H0W7 228 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 MAGEH1Q9H213 219 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 TCEAL2Q9H3H9 227 aaPredicted RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PREBQ9HCU5 417 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 SLC6A20Q9NP91 592 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 MBNL1Q9NR56 388 aaKnown RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PARVAQ9NVD7 372 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 KLHL11Q9NVR0 708 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 DNAJC28Q9NX36 388 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 AIPL1Q9NZN9 384 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 MYOTQ9UBF9 498 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PNMA8BQ9ULN7 279 aaPredicted RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 CBLCQ9ULV8 474 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 HPCAL4Q9UM19 191 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 APOBEC2Q9Y235 224 aaKnown RBP5.96□□□□□ -1.46
CDHR3-213ENST00000488386 PCDHGB2Q9Y5G2 931 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 ACACBO00763 2458 aa5.96□□□□□ -1.46
CDHR3-213ENST00000488386 A0A087X0T9 212 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 A0A0U1RQS6 177 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PLD2O14939 933 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 HGSO14964 777 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 MUSKO15146 869 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 DAPK3O43293 454 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 TNFSF14O43557 240 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PRPSAP2O60256 369 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 TRIM16O95361 564 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 IGSF6O95976 241 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 568.2 ms