RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 HACL1Q9UJ83 578 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 GABRQQ9UN88 632 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 ICKQ9UPZ9 632 aa4.47□□□□□ -1.69
PTCD3-214ENST00000483925 TRBV2A0A0J9YWF9 115 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 CENPVL1A0A0U1RR11 272 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 AP4M1O00189 453 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 AP3B1O00203 1094 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 LEFTY2O00292 366 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 CACNB4O00305 520 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SMAD9O15198 467 aaKnown RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 PRAMEF2O60811 474 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 MBPP02686 304 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 MMP2P08253 660 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 KRT5P13647 590 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ETS1P14921 441 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SFPQP23246 707 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 GATA3P23771 443 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ZFP36P26651 326 aaKnown RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ACADLP28330 430 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 PBLDP30039 288 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 PRCPP42785 496 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TNNT2P45379 298 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 CENPAP49450 140 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SULT1E1P49888 294 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ZNF75DP51815 510 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 PDE1AP54750 535 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 NXPH1P58417 271 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 C21orf58P58505 322 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TAS2R40P59535 323 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 CXADRP78310 365 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 E2F1Q01094 437 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 PRKCEQ02156 737 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 GFPT1Q06210 699 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 DPYSQ14117 519 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 KRT33BQ14525 404 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 DLG2Q15700 870 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SGCBQ16585 318 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 CYP1B1Q16678 543 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 CDO1Q16878 200 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TCTN1Q2MV58 587 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TBC1D25Q3MII6 688 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 AARDQ4LEZ3 155 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 VWA5B1Q5TIE3 1220 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 CES4AQ5XG92 561 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TMEM211Q6ICI0 200 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SYCE2Q6PIF2 218 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 DPY19L3Q6ZPD9 716 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TOM1L2Q6ZVM7 507 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 DET1Q7L5Y6 550 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 MAVSQ7Z434 540 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 LDB1Q86U70 411 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TSPAN33Q86UF1 283 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ADGRG3Q86Y34 549 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 KLBQ86Z14 1044 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 DHX40Q8IX18 779 aaKnown RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 KDM8Q8N371 416 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TMEM132CQ8N3T6 1108 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 DBF4BQ8NFT6 615 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 URGCPQ8TCY9 931 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 NTN5Q8WTR8 489 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ALG14Q96F25 216 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 UROC1Q96N76 676 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 LRRC3BQ96PB8 259 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 FRG2BQ96QU4 278 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TMEM47Q9BQJ4 181 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ADGRE3Q9BY15 652 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 NUF2Q9BZD4 464 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 KCNK15Q9H427 330 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 ZNF768Q9H5H4 540 aaKnown RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SYTL2Q9HCH5 934 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 Q9N2J8 555 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 BPIFA1Q9NP55 256 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SPG21Q9NZD8 308 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 FZD4Q9ULV1 537 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 STRAPQ9Y3F4 350 aaKnown RBP4.46□□□□□ -1.7
PTCD3-214ENST00000483925 NOX1Q9Y5S8 564 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 NPHP3Q7Z494 1330 aa4.46□□□□□ -1.7
PTCD3-214ENST00000483925 TRGV11A0A075B6L2 103 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 C13orf42A0A1B0GVH6 325 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 CBY3A6NI87 242 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 AHRRA9YTQ3 701 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 ANGPT2O15123 496 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 CRCPO75575 148 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 GH1P01241 217 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 ENO1P06733 434 aaKnown RBP4.45□□□□□ -1.7
PTCD3-214ENST00000483925 IL6RP08887 468 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-214ENST00000483925 PDHBP11177 359 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 PPP3CBP16298 524 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 VCLP18206 1134 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 EPORP19235 508 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 ITGAXP20702 1163 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 KELP23276 732 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 AHCYP23526 432 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 NDUFS1P28331 727 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 CD38P28907 300 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 CCND2P30279 289 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 DIO1P49895 249 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 GPR143P51810 404 aa4.45□□□□□ -1.7
PTCD3-214ENST00000483925 CDH13P55290 713 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms