RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SFTPA2Q8IWL1 248 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ARL14Q8N4G2 192 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 WDR36Q8NI36 951 aaKnown RBP13.75□□□□□ -0.21
VARS-225ENST00000482996 SNIP1Q8TAD8 396 aaKnown RBP13.75□□□□□ -0.21
VARS-225ENST00000482996 BLOC1S5Q8TDH9 187 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 GLYATL1Q969I3 302 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 LRRC45Q96CN5 670 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ZNF578Q96N58 590 aaPredicted RBP13.75□□□□□ -0.21
VARS-225ENST00000482996 SPATA13Q96N96 652 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 TMEM74Q96NL1 305 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 PLEKHG4BQ96PX9 1271 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 FAM118BQ9BPY3 351 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 FICDQ9BVA6 458 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 TRIM39Q9HCM9 518 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
VARS-225ENST00000482996 GUCA1BQ9UMX6 200 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 AAR2Q9Y312 384 aaKnown RBP13.75□□□□□ -0.21
VARS-225ENST00000482996 PKP3Q9Y446 797 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ST14Q9Y5Y6 855 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
VARS-225ENST00000482996 ITPR1Q14643 2758 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 LAMA5O15230 3695 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 A0A087WV48 116 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 A0A1W2PQM1 296 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 AURKAO14965 403 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 DDX3YO15523 660 aaKnown RBP13.74□□□□□ -0.21
VARS-225ENST00000482996 GRID2O43424 1007 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 TLX3O43711 291 aaPredicted RBP13.74□□□□□ -0.21
VARS-225ENST00000482996 NRDCO43847 1150 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 PPFIA2O75334 1257 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 DXOO77932 396 aaKnown RBP13.74□□□□□ -0.21
VARS-225ENST00000482996 PSMB4P28070 264 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 DEKP35659 375 aaKnown RBP13.74□□□□□ -0.21
VARS-225ENST00000482996 GPR3P46089 330 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 INHBCP55103 352 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 EIF3IQ13347 325 aaKnown RBP13.74□□□□□ -0.21
VARS-225ENST00000482996 CHST15Q7LFX5 561 aaPredicted RBP13.74□□□□□ -0.21
VARS-225ENST00000482996 NAGSQ8N159 534 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 TTC30BQ8N4P2 665 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 LIN37Q96GY3 246 aaPredicted RBP13.74□□□□□ -0.21
VARS-225ENST00000482996 HES6Q96HZ4 224 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 OR2AG1Q9H205 316 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 EPB41L5Q9HCM4 733 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 BPIFA1Q9NP55 256 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 THSD1Q9NS62 852 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 ATXN10Q9UBB4 475 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 SATB2Q9UPW6 733 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 PRKAB1Q9Y478 270 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 PCDHGA8Q9Y5G5 932 aa13.74□□□□□ -0.21
VARS-225ENST00000482996 ZFHX4Q86UP3 3567 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 CASC3O15234 703 aaKnown RBP13.73□□□□□ -0.21
VARS-225ENST00000482996 VEGFDO43915 354 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 AGTP01019 485 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 ACP5P13686 325 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 SLC2A4P14672 509 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 ZNF8P17098 575 aaPredicted RBP13.73□□□□□ -0.21
VARS-225ENST00000482996 ALDH4A1P30038 563 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 CCKBRP32239 447 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 SPAM1P38567 509 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 MLLT3P42568 568 aaPredicted RBP13.73□□□□□ -0.21
VARS-225ENST00000482996 PDX1P52945 283 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 B4GALNT1Q00973 533 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 CLPPQ16740 277 aaPredicted RBP13.73□□□□□ -0.21
VARS-225ENST00000482996 AMZ1Q400G9 498 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 SEL1L2Q5TEA6 688 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 FOXR1Q6PIV2 292 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 C19orf48Q6RUI8 117 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 IGF2-ASQ6U949 168 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 ARHGEF18Q6ZSZ5 1173 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 ZNF438Q7Z4V0 828 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 GDAP1Q8TB36 358 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 CCDC110Q8TBZ0 833 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 HNRNPLLQ8WVV9 542 aaKnown RBP13.73□□□□□ -0.21
VARS-225ENST00000482996 PATE1Q8WXA2 126 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 VPS35Q96QK1 796 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 FOXP3Q9BZS1 431 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 STN1Q9H668 368 aaKnown RBP13.73□□□□□ -0.21
VARS-225ENST00000482996 ARFGAP3Q9NP61 516 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 IL17CQ9P0M4 197 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 ATXN7L1Q9ULK2 861 aaPredicted RBP13.73□□□□□ -0.21
VARS-225ENST00000482996 LHX6Q9UPM6 363 aa13.73□□□□□ -0.21
VARS-225ENST00000482996 C5orf60A6NFR6 353 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 C2orf81A6NN90 581 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 KMOO15229 486 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 STX7O15400 261 aaKnown RBP13.72□□□□□ -0.21
VARS-225ENST00000482996 CPNE6O95741 557 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 EIF2S3P41091 472 aaKnown RBP13.72□□□□□ -0.21
VARS-225ENST00000482996 ABCG1P45844 678 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 PCBP4P57723 403 aaKnown RBP13.72□□□□□ -0.21
VARS-225ENST00000482996 OR1D5P58170 312 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 KLF1Q13351 362 aaPredicted RBP13.72□□□□□ -0.21
VARS-225ENST00000482996 GTF2H3Q13889 308 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 NR1D2Q14995 579 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 ATP13A5Q4VNC0 1218 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 ZNF648Q5T619 568 aaPredicted RBP13.72□□□□□ -0.21
VARS-225ENST00000482996 RAB11FIP2Q7L804 512 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms