RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 RASGRP3Q8IV61 690 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 ATPAF2Q8N5M1 289 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 HSPH1Q92598 858 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 CSPG4P5Q96PW8 444 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 PLEKHG4BQ96PX9 1271 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 OR6C1Q96RD1 312 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 WDR24Q96S15 920 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 TWSG1Q9GZX9 223 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 VPS18Q9P253 973 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 KCND3Q9UK17 655 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 SLC30A1Q9Y6M5 507 aa12.67□□□□□ -0.38
TMEM54-206ENST00000482771 LGALS16A8MUM7 142 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 GRID2O43424 1007 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 CREG1O75629 220 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 NDUFA10O95299 355 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 C9P02748 559 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 PDGFAP04085 211 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 ANKRD34CP0C6C1 535 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 AMD1P17707 334 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 CDK11BP21127 795 aaKnown RBP12.66□□□□□ -0.38
TMEM54-206ENST00000482771 IL11RAQ14626 422 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 DPYSL2Q16555 572 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 SMTNL2Q2TAL5 461 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
TMEM54-206ENST00000482771 PPP1R2P3Q6NXS1 205 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 TEX26Q8N6G2 289 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 GALNT11Q8NCW6 608 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 ANKRD20A12PQ8NF67 263 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 STAMBPL1Q96FJ0 436 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 TGM7Q96PF1 710 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 ERGIC2Q96RQ1 377 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 SYT11Q9BT88 431 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 FAM83DQ9H4H8 585 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 KLC4Q9NSK0 619 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 SCHIP1Q9P0W5 487 aaPredicted RBP12.66□□□□□ -0.38
TMEM54-206ENST00000482771 LIMA1Q9UHB6 759 aaKnown RBP12.66□□□□□ -0.38
TMEM54-206ENST00000482771 LNPEPQ9UIQ6 1025 aa12.66□□□□□ -0.38
TMEM54-206ENST00000482771 LRRC10BA6NIK2 292 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 KIF1CO43896 1103 aaKnown RBP12.65□□□□□ -0.38
TMEM54-206ENST00000482771 NUAK1O60285 661 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 SPAG6O75602 509 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 RASSF9O75901 435 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 DNAJB5O75953 348 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 UBXN7O94888 489 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 PRLP01236 227 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 VIPP01282 170 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 RARAP10276 462 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 TCF4P15884 667 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 XRCC1P18887 633 aaPredicted RBP12.65□□□□□ -0.38
TMEM54-206ENST00000482771 PCK1P35558 622 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 LEPRP48357 1165 aaKnown RBP12.65□□□□□ -0.38
TMEM54-206ENST00000482771 PMS2P54278 862 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 UBE2IP63279 158 aaKnown RBP12.65□□□□□ -0.38
TMEM54-206ENST00000482771 DSC2Q02487 901 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 ZNF648Q5T619 568 aaPredicted RBP12.65□□□□□ -0.38
TMEM54-206ENST00000482771 TMEM26Q6ZUK4 368 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 CPT1CQ8TCG5 803 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 POLR1EQ9GZS1 481 aaKnown RBP12.65□□□□□ -0.38
TMEM54-206ENST00000482771 OSGEPL1Q9H4B0 414 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 UCK1Q9HA47 277 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 ARFGAP3Q9NP61 516 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.65□□□□□ -0.38
TMEM54-206ENST00000482771 ATXN10Q9UBB4 475 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 MYO1AQ9UBC5 1043 aa12.65□□□□□ -0.38
TMEM54-206ENST00000482771 MN1Q10571 1320 aaPredicted RBP12.64□□□□□ -0.39
TMEM54-206ENST00000482771 LILRA5A6NI73 299 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 TOX3O15405 576 aaPredicted RBP12.64□□□□□ -0.39
TMEM54-206ENST00000482771 SEMA7AO75326 666 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 RECKO95980 971 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 ZNF8P17098 575 aaPredicted RBP12.64□□□□□ -0.39
TMEM54-206ENST00000482771 CES1P23141 567 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 CASP14P31944 242 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 SLC19A1P41440 591 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 SPINT3P49223 89 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 DNASE1L3Q13609 305 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 CACHD1Q5VU97 1274 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 LRRC49Q8IUZ0 686 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 PHYKPLQ8IUZ5 450 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 APLFQ8IW19 511 aaPredicted RBP12.64□□□□□ -0.39
TMEM54-206ENST00000482771 TRIM48Q8IWZ4 208 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 RAVER1Q8IY67 606 aaKnown RBP12.64□□□□□ -0.39
TMEM54-206ENST00000482771 AOPEPQ8N6M6 819 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 AVL9Q8NBF6 648 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 SSC4DQ8WTU2 575 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 TRIM55Q9BYV6 548 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 OR2AG1Q9H205 316 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 CARD9Q9H257 536 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.39
TMEM54-206ENST00000482771 ZNF624Q9P2J8 865 aaPredicted RBP12.64□□□□□ -0.39
TMEM54-206ENST00000482771 SLC23A2Q9UGH3 650 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 DNPEPQ9ULA0 475 aa12.64□□□□□ -0.39
TMEM54-206ENST00000482771 TTLL3Q9Y4R7 772 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms