RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CHRNA6Q15825 494 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 ZNF648Q5T619 568 aaPredicted RBP18.2■□□□□ 0.5
SMIM4-204ENST00000482728 HES3Q5TGS1 186 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 C4orf22Q6V702 233 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 CHST15Q7LFX5 561 aaPredicted RBP18.2■□□□□ 0.5
SMIM4-204ENST00000482728 NRROSQ86YC3 692 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 OR4K2Q8NGD2 314 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 TTC25Q96NG3 672 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 VPS35Q96QK1 796 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 SPATS2LQ9NUQ6 558 aaKnown RBP18.2■□□□□ 0.5
SMIM4-204ENST00000482728 APPL1Q9UKG1 709 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 PRKAB1Q9Y478 270 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 PLEKHM1Q9Y4G2 1056 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 KCTD3Q9Y597 815 aa18.2■□□□□ 0.5
SMIM4-204ENST00000482728 PTPRBP23467 1997 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 GPR89AB7ZAQ6 455 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 GRID2O43424 1007 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 VEGFDO43915 354 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A9O60656 530 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 DNAJC6O75061 913 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 CDK14O94921 469 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 GPR89BP0CG08 455 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 ZNF8P17098 575 aaPredicted RBP18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A6P19224 532 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A1P22309 533 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A4P22310 534 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A3P35503 534 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A5P35504 534 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 KCNJ1P48048 391 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 INSM1Q01101 510 aaPredicted RBP18.19■□□□□ 0.5
SMIM4-204ENST00000482728 CCDC173Q0VFZ6 552 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 PPP1R21Q6ZMI0 780 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 PRUNE1Q86TP1 453 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 RASGEF1CQ8N431 466 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 DNAAF3Q8N9W5 541 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 GPR156Q8NFN8 814 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 ZNF398Q8TD17 642 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 ZDHHC1Q8WTX9 485 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 MS4A14Q96JA4 679 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A7Q9HAW7 530 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A10Q9HAW8 530 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 UGT1A8Q9HAW9 530 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 CLCA2Q9UQC9 943 aa18.19■□□□□ 0.5
SMIM4-204ENST00000482728 MT-CO3P00414 261 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 ZSCAN5DPP0CG00 497 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 RPL22P35268 128 aaKnown RBP18.18■□□□□ 0.5
SMIM4-204ENST00000482728 HADHAP40939 763 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 CLDN6P56747 220 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 GNG11P61952 73 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 TARDBPQ13148 414 aaKnown RBP eCLIP18.18■□□□□ 0.5
SMIM4-204ENST00000482728 MSLNQ13421 630 aaPredicted RBP18.18■□□□□ 0.5
SMIM4-204ENST00000482728 GTF2H3Q13889 308 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 SEPT6Q14141 434 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 C14orf28Q4W4Y0 310 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 PERM1Q5SV97 790 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 LDLRAP1Q5SW96 308 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 ADGRG6Q86SQ4 1221 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 MARCH9Q86YJ5 346 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 PRELID2Q8N945 189 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 MAGOHBQ96A72 148 aaKnown RBP18.18■□□□□ 0.5
SMIM4-204ENST00000482728 CNTNAP3BQ96NU0 1288 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 OSBPL9Q96SU4 736 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 CNTNAP3Q9BZ76 1288 aa18.18■□□□□ 0.5
SMIM4-204ENST00000482728 TTC7AQ9ULT0 858 aaPredicted RBP18.18■□□□□ 0.5
SMIM4-204ENST00000482728 UNC13CQ8NB66 2214 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 USP27XA6NNY8 438 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 PGRMC1O00264 195 aaKnown RBP18.17■□□□□ 0.5
SMIM4-204ENST00000482728 NOBOXO60393 691 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 MTX2O75431 263 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 PRAMEF1O95521 474 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 APRTP07741 180 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 ACP5P13686 325 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 GLB1P16278 677 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 TMPRSS15P98073 1019 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 CDH17Q12864 832 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 TMEM115Q12893 351 aaPredicted RBP18.17■□□□□ 0.5
SMIM4-204ENST00000482728 SEMA5AQ13591 1074 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 POU6F1Q14863 301 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 UNQ6494/PRO21346Q6UXR6 183 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 GLIS1Q8NBF1 620 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 OR52K1Q8NGK4 314 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 WDR48Q8TAF3 677 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 CCDC74AQ96AQ1 378 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 C19orf43Q9BQ61 176 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 CCDC3Q9BQI4 270 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 AP1M1Q9BXS5 423 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 ZCCHC2Q9C0B9 1178 aaKnown RBP18.17■□□□□ 0.5
SMIM4-204ENST00000482728 ASB8Q9H765 288 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 PIH1D1Q9NWS0 290 aaKnown RBP18.17■□□□□ 0.5
SMIM4-204ENST00000482728 LRIT1Q9P2V4 623 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 FKBPLQ9UIM3 349 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 TMPRSS11EQ9UL52 423 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 PYCARDQ9ULZ3 195 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 SNX12Q9UMY4 172 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 ST14Q9Y5Y6 855 aa18.17■□□□□ 0.5
SMIM4-204ENST00000482728 KMOO15229 486 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 LDB2O43679 373 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 SRP72O76094 671 aaKnown RBP18.16■□□□□ 0.5
SMIM4-204ENST00000482728 SUN1O94901 812 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 ECEL1O95672 775 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms