RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CLDN7O95471 211 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 CYLC2Q14093 348 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 TRIP10Q15642 601 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 PTPRNQ16849 979 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 RFLNAQ6ZTI6 216 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 ADGRD2Q7Z7M1 963 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 PIH1D2Q8WWB5 315 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 GBP5Q96PP8 586 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 ADGRE3Q9BY15 652 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 SARS2Q9NP81 518 aaKnown RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 NCKIPSDQ9NZQ3 722 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 NCF1BA6NI72 391 aaPredicted RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 ENO4A6NNW6 628 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 NCF1CA8MVU1 366 aaPredicted RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 UBXN8O00124 270 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SNUPNO95149 360 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 CA3P07451 260 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 NCF1P14598 390 aaPredicted RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 KPNA2P52292 529 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 MESP2Q0VG99 397 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 HERC3Q15034 1050 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 TYSND1Q2T9J0 566 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SH2D4BQ5SQS7 431 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 AGAP9Q5VTM2 703 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 LPCAT4Q643R3 524 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 TAS2R42Q7RTR8 314 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 ZNF366Q8N895 744 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SNX31Q8N9S9 440 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SIDT2Q8NBJ9 832 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 ESAMQ96AP7 390 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 MYO19Q96H55 970 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 GPR21Q99679 349 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 BOCQ9BWV1 1114 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 BBS2Q9BXC9 721 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 ZNF711Q9Y462 761 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 ARIH1Q9Y4X5 557 aaPredicted RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 IRAK3Q9Y616 596 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 TNRC18O15417 2968 aaPredicted RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 A0A1B0GTL3 188 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 CCDC189A1A4V9 331 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 H3BNX3 289 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 UBFD1O14562 309 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 SRP72O76094 671 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 PGLSO95336 258 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 LATS1O95835 1130 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SRCP12931 536 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 CD1DP15813 335 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 PEX2P28328 305 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 RGS19P49795 217 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 CREMQ03060 361 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 PDAP1Q13442 181 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 MED21Q13503 144 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SLC14A2Q15849 920 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 LRRC36Q1X8D7 754 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 MPPE1Q53F39 396 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SFT2D3Q587I9 215 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 PITRM1Q5JRX3 1037 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 TMEM215Q68D42 235 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 EFCAB3Q8N7B9 438 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 NSUN5Q96P11 429 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 TUBGCP5Q96RT8 1024 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 AARSD1Q9BTE6 412 aaKnown RBP14.36□□□□□ -0.11
CHD3-211ENST00000481999 APOL5Q9BWW9 433 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 GPR63Q9BZJ6 419 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 ZNF385DQ9H6B1 395 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 GTSE1Q9NYZ3 720 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 BCAP29Q9UHQ4 241 aa14.36□□□□□ -0.11
CHD3-211ENST00000481999 C1orf232A0A0U1RR37 186 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 MAP3K13O43283 966 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 NDUFS3O75489 264 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 RHOBTB1O94844 696 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 ZCCHC18P0CG32 403 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 UQCRBP14927 111 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 CEBPBP17676 345 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 ITGB6P18564 788 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 UGT1A6P19224 532 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 UGT1A1P22309 533 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 UGT1A4P22310 534 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 UGT1A3P35503 534 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 UGT1A5P35504 534 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 RPL26P61254 145 aaKnown RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 PFKPQ01813 784 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHD3-211ENST00000481999 POM121L1PQ3SYA9 428 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 CTSL3PQ5NE16 218 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 LY6G5CQ5SRR4 150 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 ARMC12Q5T9G4 340 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 NAIF1Q69YI7 327 aaPredicted RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 CLEC6AQ6EIG7 209 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 FAM45BPQ6NSW5 357 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 RETSATQ6NUM9 610 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 BNC2Q6ZN30 1099 aaPredicted RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 DSELQ8IZU8 1212 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 CLDN19Q8N6F1 224 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 PHC3Q8NDX5 983 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 GPR150Q8NGU9 434 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 FIBINQ8TAL6 211 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms