RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 CWC15Q9P013 229 aaKnown RBP17.15■□□□□ 0.34
RXRB-203ENST00000481441 PADI1Q9ULC6 663 aa17.15■□□□□ 0.34
RXRB-203ENST00000481441 CNOT6Q9ULM6 557 aaKnown RBP17.15■□□□□ 0.34
RXRB-203ENST00000481441 ANKRD17O75179 2603 aaKnown RBP17.14■□□□□ 0.33
RXRB-203ENST00000481441 OR5K4A6NMS3 321 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 MAFKO60675 156 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 CCNYL3P0C7X3 344 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 ZNF30P17039 623 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 PSMA2P25787 234 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 PGDP52209 483 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 STC1P52823 247 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 MCOLN2Q8IZK6 566 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 AVL9Q8NBF6 648 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 CT55Q8WUE5 264 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 ELMO2Q96JJ3 720 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 PLEKHG4BQ96PX9 1271 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 UCK1Q9HA47 277 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 CASS4Q9NQ75 786 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 SEPT11Q9NVA2 429 aaKnown RBP17.14■□□□□ 0.33
RXRB-203ENST00000481441 LNPEPQ9UIQ6 1025 aa17.14■□□□□ 0.33
RXRB-203ENST00000481441 PCDHGA9Q9Y5G4 932 aaKnown RBP17.14■□□□□ 0.33
RXRB-203ENST00000481441 A0A0J9YYE9 177 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 TCP11X1B4DZS4 312 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 C21orf140B9A014 251 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 SPAG6O75602 509 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 CLDN1O95832 211 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 TRBC1P01850 177 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 CASP14P31944 242 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 LEPRP48357 1165 aaKnown RBP17.13■□□□□ 0.33
RXRB-203ENST00000481441 SEPHS1P49903 392 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 MAMLD1Q13495 774 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 SYCP1Q15431 976 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 INPP5JQ15735 1006 aaPredicted RBP17.13■□□□□ 0.33
RXRB-203ENST00000481441 EIF2S3LQ2VIR3 472 aaKnown RBP17.13■□□□□ 0.33
RXRB-203ENST00000481441 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.13■□□□□ 0.33
RXRB-203ENST00000481441 PRR30Q53SZ7 412 aaPredicted RBP17.13■□□□□ 0.33
RXRB-203ENST00000481441 PAPD7Q5XG87 772 aaKnown RBP17.13■□□□□ 0.33
RXRB-203ENST00000481441 CPZQ66K79 652 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 RBM43Q6ZSC3 357 aaKnown RBP17.13■□□□□ 0.33
RXRB-203ENST00000481441 TICAM1Q8IUC6 712 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 PSTKQ8IV42 348 aaKnown RBP17.13■□□□□ 0.33
RXRB-203ENST00000481441 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 TGM7Q96PF1 710 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 WDR24Q96S15 920 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 AGPAT1Q99943 283 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 SLC25A23Q9BV35 468 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 BRD8Q9H0E9 1235 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 ACTL8Q9H568 366 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 RMI1Q9H9A7 625 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 LHX9Q9NQ69 397 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 SLC30A1Q9Y6M5 507 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 CELSR2Q9HCU4 2923 aa17.13■□□□□ 0.33
RXRB-203ENST00000481441 LRBAP50851 2863 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 SYCE3A1L190 88 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 WIPF3A6NGB9 483 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 MT-ND3P03897 115 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 TYRP1P17643 537 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 MMP13P45452 471 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 ZNF135P52742 658 aaPredicted RBP17.12■□□□□ 0.33
RXRB-203ENST00000481441 MRPL49Q13405 166 aaKnown RBP17.12■□□□□ 0.33
RXRB-203ENST00000481441 ACAD10Q6JQN1 1059 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 TMEM26Q6ZUK4 368 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 NDUFAF2Q8N183 169 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 THAP4Q8WY91 577 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 IGSF5Q9NSI5 407 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 ETNK2Q9NVF9 386 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 SCHIP1Q9P0W5 487 aaPredicted RBP17.12■□□□□ 0.33
RXRB-203ENST00000481441 SIK3Q9Y2K2 1263 aa17.12■□□□□ 0.33
RXRB-203ENST00000481441 KIF1CO43896 1103 aaKnown RBP17.11■□□□□ 0.33
RXRB-203ENST00000481441 UBXN7O94888 489 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 TIAF1O95411 115 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 XRCC1P18887 633 aaPredicted RBP17.11■□□□□ 0.33
RXRB-203ENST00000481441 MIPP30301 263 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 CLCNKAP51800 687 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 CHAF1BQ13112 559 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 UGT8Q16880 541 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 MARC1Q5VT66 337 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 PRSS42Q7Z5A4 293 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 PPP1R3BQ86XI6 285 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 RAVER1Q8IY67 606 aaKnown RBP17.11■□□□□ 0.33
RXRB-203ENST00000481441 KLHL6Q8WZ60 621 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 SEC14L1Q92503 715 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 RUFY1Q96T51 708 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 AKIRIN1Q9H9L7 192 aaPredicted RBP17.11■□□□□ 0.33
RXRB-203ENST00000481441 CRYBG3Q68DQ2 2970 aa17.11■□□□□ 0.33
RXRB-203ENST00000481441 FADS2P1A8MWK0 482 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 GRID2O43424 1007 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 PRPSAP2O60256 369 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 NUAK1O60285 661 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 CDH6P55285 790 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 LAMB3Q13751 1172 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 IHHQ14623 411 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 HENMT1Q5T8I9 393 aaKnown RBP17.1■□□□□ 0.33
RXRB-203ENST00000481441 PLEKHA7Q6IQ23 1121 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 PHYKPLQ8IUZ5 450 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 AOPEPQ8N6M6 819 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 Q8NA96 180 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 TCTN2Q96GX1 697 aa17.1■□□□□ 0.33
RXRB-203ENST00000481441 ZNF624Q9P2J8 865 aaPredicted RBP17.1■□□□□ 0.33
RXRB-203ENST00000481441 ADGRG1Q9Y653 693 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms