RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 STK39Q9UEW8 545 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 TINAGQ9UJW2 476 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 CMAHPQ9Y471 501 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 LOXL2Q9Y4K0 774 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 PCF11O94913 1555 aaKnown RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 UHRF1BP1LA0JNW5 1464 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 NCOA2Q15596 1464 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 ZNF644Q9H582 1327 aaPredicted RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 GOLGA6L9A6NEM1 432 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 EIF4E1BA6NMX2 242 aaKnown RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 CDRT15L2A8MXV6 281 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 CTDSP2O14595 271 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 HS3ST1O14792 307 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 AHCYL1O43865 530 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 STARD3NLO95772 234 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 NGFRP08138 427 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 FCGR1AP12314 374 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 SRCP12931 536 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 SAT1P21673 171 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 SLC15A1P46059 708 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 BNC1Q01954 994 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 TRAF3Q13114 568 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 MYBPHQ13203 477 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 TOMM20Q15388 145 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 KCNT1Q5JUK3 1230 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 PAPPA-AS1Q5QFB9 102 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 PMS2CLQ68D20 193 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 CCNI2Q6ZMN8 369 aaPredicted RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 CREB3L2Q70SY1 520 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 EPHX4Q8IUS5 362 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 FOXRED2Q8IWF2 684 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 PGBD5Q8N414 524 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 PCDH20Q8N6Y1 951 aaKnown RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 OR1J2Q8NGS2 313 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 DNAAF4Q8WXU2 420 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 GRAMD2BQ96HH9 432 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 THOC3Q96J01 351 aaKnown RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 LYZL4Q96KX0 146 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 FIZ1Q96SL8 496 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 CSF3RQ99062 836 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 GAD1Q99259 594 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 SRSF8Q9BRL6 282 aaKnown RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 TM6SF1Q9BZW5 370 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 SEBOXQ9HB31 216 aaPredicted RBP3.8□□□□□ -1.8
CBX3-207ENST00000481300 EPB41L5Q9HCM4 733 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 ACSL5Q9ULC5 683 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 PCDHGB4Q9UN71 923 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 ABCA8O94911 1581 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 TIAM1Q13009 1591 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 ABCC2Q92887 1545 aa3.8□□□□□ -1.8
CBX3-207ENST00000481300 MYOM3Q5VTT5 1437 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 FGD6Q6ZV73 1430 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 RRBP1Q9P2E9 1410 aaKnown RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 IGLV5-37A0A075B6J1 123 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 LRRC72A6NJI9 287 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 MAP2K7O14733 419 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 RFPL2O75678 378 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 GJB3O75712 270 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 HSP90AA1P07900 732 aaKnown RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 EIF2DP41214 584 aaKnown RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 MSH2P43246 934 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 FASLGP48023 281 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 GPR143P51810 404 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 NANOS2P60321 138 aaKnown RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 LTBQ06643 244 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 SREBF2Q12772 1141 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 GRSF1Q12849 480 aaKnown RBP eCLIP3.79□□□□□ -1.8
CBX3-207ENST00000481300 STK4Q13043 487 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 OASLQ15646 514 aaKnown RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 MYLK3Q32MK0 819 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 RHBDF2Q6PJF5 856 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 CFAP77Q6ZQR2 320 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 CCDC190Q86UF4 302 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 GPR180Q86V85 440 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 SPATA2LQ8IUW3 424 aaPredicted RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 ARID3BQ8IVW6 561 aaPredicted RBP3.79□□□□□ -1.8
CBX3-207ENST00000481300 BEST3Q8N1M1 668 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 CCDC89Q8N998 374 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 POC5Q8NA72 575 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 HM13Q8TCT9 377 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 ZNF479Q96JC4 524 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 CMKLR1Q99788 373 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 TEX12Q9BXU0 123 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 HRH4Q9H3N8 390 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 MAGIXQ9H6Y5 334 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 MTMR10Q9NXD2 777 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 MCM9Q9NXL9 1143 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 RPS6KA6Q9UK32 745 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 SNX8Q9Y5X2 465 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 SHROOM2Q13796 1616 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 HECW1Q76N89 1606 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 ARHGEF11O15085 1522 aa3.79□□□□□ -1.8
CBX3-207ENST00000481300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.78□□□□□ -1.8
CBX3-207ENST00000481300 CTTNBP2Q8WZ74 1663 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 FIBPO43427 364 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 CLDN14O95500 239 aa3.78□□□□□ -1.8
CBX3-207ENST00000481300 ICAM1P05362 532 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms