RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SHC3Q92529 594 aa11.03□□□□□ -0.64
CCDC18-208ENST00000479653 SCARF2Q96GP6 870 aaPredicted RBP11.03□□□□□ -0.64
CCDC18-208ENST00000479653 BARD1Q99728 777 aaKnown RBP11.03□□□□□ -0.64
CCDC18-208ENST00000479653 TRIM5Q9C035 493 aa11.03□□□□□ -0.64
CCDC18-208ENST00000479653 PDCL3Q9H2J4 239 aa11.03□□□□□ -0.64
CCDC18-208ENST00000479653 NOL6Q9H6R4 1146 aaKnown RBP11.03□□□□□ -0.64
CCDC18-208ENST00000479653 CHST11Q9NPF2 352 aa11.03□□□□□ -0.64
CCDC18-208ENST00000479653 KCTD5Q9NXV2 234 aa11.03□□□□□ -0.64
CCDC18-208ENST00000479653 CPNE7Q9UBL6 633 aa11.03□□□□□ -0.64
CCDC18-208ENST00000479653 RARRES3Q9UL19 164 aa11.03□□□□□ -0.64
CCDC18-208ENST00000479653 KLF2Q9Y5W3 355 aaPredicted RBP11.03□□□□□ -0.64
CCDC18-208ENST00000479653 ANKRD36A6QL64 1941 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 LRRC10BA6NIK2 292 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 TOX3O15405 576 aaPredicted RBP11.02□□□□□ -0.65
CCDC18-208ENST00000479653 PRICKLE3O43900 615 aaPredicted RBP11.02□□□□□ -0.65
CCDC18-208ENST00000479653 UBXN7O94888 489 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 HTR1EP28566 365 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 RGRP47804 291 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 RRADP55042 308 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 MARSP56192 900 aaKnown RBP11.02□□□□□ -0.65
CCDC18-208ENST00000479653 KRTAP10-9P60411 292 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 NRG1Q02297 640 aaPredicted RBP11.02□□□□□ -0.65
CCDC18-208ENST00000479653 TUBB3Q13509 450 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 LLGL1Q15334 1064 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 CNGA3Q16281 694 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 CDO1Q16878 200 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 RAB6CQ53S08 254 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 C2CD6Q53TS8 623 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 TCP11X2Q5H9J9 407 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 CRB2Q5IJ48 1285 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 MIIPQ5JXC2 388 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 VWA5B1Q5TIE3 1220 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 FAM69BQ5VUD6 431 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 TRNP1Q6NT89 227 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 FAM92BQ6ZTR7 304 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 Q6ZVL8 140 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 HSD11B1LQ7Z5J1 315 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 CDH24Q86UP0 819 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 ZADH2Q8N4Q0 377 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 C18orf8Q96DM3 657 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 SGSM3Q96HU1 749 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 TRIM8Q9BZR9 551 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 RAB6CQ9H0N0 254 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 SAMSN1Q9NSI8 373 aaKnown RBP11.02□□□□□ -0.65
CCDC18-208ENST00000479653 OGFRQ9NZT2 677 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 LIMA1Q9UHB6 759 aaKnown RBP11.02□□□□□ -0.65
CCDC18-208ENST00000479653 CD84Q9UIB8 345 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 KCNK6Q9Y257 313 aa11.02□□□□□ -0.65
CCDC18-208ENST00000479653 KIR2DS5A0A0G2JLQ3 304 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 A0A0G2JNG1 304 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 J3KR12 359 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 KIR2DS3K7RE56 304 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 ALPPP05187 535 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 SLC2A4P14672 509 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 EPHB2P29323 1055 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 MTIF2P46199 727 aaKnown RBP11.01□□□□□ -0.65
CCDC18-208ENST00000479653 VAV2P52735 878 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 UBASH3AP57075 661 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 YBEYP58557 167 aaPredicted RBP11.01□□□□□ -0.65
CCDC18-208ENST00000479653 FANCCQ00597 558 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 LAMB3Q13751 1172 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 KIR2DS5Q14953 304 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 ENOSF1Q7L5Y1 443 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 CUZD1Q86UP6 607 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 CBARPQ8N350 705 aaPredicted RBP11.01□□□□□ -0.65
CCDC18-208ENST00000479653 RTL3Q8N8U3 475 aaKnown RBP11.01□□□□□ -0.65
CCDC18-208ENST00000479653 TSEN2Q8NCE0 465 aaKnown RBP11.01□□□□□ -0.65
CCDC18-208ENST00000479653 ADAMTS17Q8TE56 1095 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 INPP5DQ92835 1189 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 HDAC11Q96DB2 347 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 ECHDC3Q96DC8 303 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 DTD2Q96FN9 168 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 HERPUD2Q9BSE4 406 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 MLPHQ9BV36 600 aaPredicted RBP11.01□□□□□ -0.65
CCDC18-208ENST00000479653 NEU3Q9UQ49 428 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
CCDC18-208ENST00000479653 LILRA5A6NI73 299 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 GOLGA6L6A8MZA4 724 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 PALMO75781 387 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 HEXIM1O94992 359 aaKnown RBP11□□□□□ -0.65
CCDC18-208ENST00000479653 KLK3P07288 261 aaPredicted RBP11□□□□□ -0.65
CCDC18-208ENST00000479653 ACP5P13686 325 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 F3P13726 295 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 FOLR1P15328 257 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 NELFEP18615 380 aaKnown RBP11□□□□□ -0.65
CCDC18-208ENST00000479653 CAPN3P20807 821 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 SSTR2P30874 369 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 VIPR1P32241 457 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 SCNN1BP51168 640 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 KCNAB1Q14722 419 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 C15orf59Q2T9L4 293 aaPredicted RBP11□□□□□ -0.65
CCDC18-208ENST00000479653 PARP15Q460N3 678 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 IZUMO3Q5VZ72 239 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 IRGCQ6NXR0 463 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 BNIPLQ7Z465 357 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 CREBRFQ8IUR6 639 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 TRIM48Q8IWZ4 208 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 ZNF295-AS1Q8N0V1 137 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 EMC1Q8N766 993 aa11□□□□□ -0.65
CCDC18-208ENST00000479653 ENDOVQ8N8Q3 282 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms