RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ARGFXA6NJG6 315 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PDZK1P1A8MUH7 402 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 KIR2DS3K7RE56 304 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 DNAJC6O75061 913 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CREG1O75629 220 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 UBXN7O94888 489 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CLDN7O95471 211 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 SOD1P00441 154 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 TRBC1P01850 177 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 F3P13726 295 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 FERP16591 822 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF30P17039 623 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CDK11BP21127 795 aaKnown RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CA4P22748 312 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 SERPINB6P35237 376 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 GJC1P36383 396 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 LEPRP48357 1165 aaKnown RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CD97P48960 835 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 ARL4DP49703 201 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CCL11P51671 97 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PGDP52209 483 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PMS2P54278 862 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CDH6P55285 790 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 RPS18P62269 152 aaKnown RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 DSC2Q02487 901 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PTSQ03393 145 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 MAMLD1Q13495 774 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 DNASE1L3Q13609 305 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 DPYSQ14117 519 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 MAP7Q14244 749 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 KRT81Q14533 505 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 KIR2DS5Q14953 304 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 NADK2Q4G0N4 442 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF648Q5T619 568 aaPredicted RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CACHD1Q5VU97 1274 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 ALS2CLQ60I27 953 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CAPRIN2Q6IMN6 1127 aaKnown RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 IYDQ6PHW0 289 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 LYSMD3Q7Z3D4 306 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 TECPR1Q7Z6L1 1165 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 AVL9Q8NBF6 648 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PRR7Q8TB68 274 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 CT55Q8WUE5 264 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PIH1D2Q8WWB5 315 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 C9orf72Q96LT7 481 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 MCCC1Q96RQ3 725 aaPredicted RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 SLC25A23Q9BV35 468 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 SPATA16Q9BXB7 569 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 TRIM55Q9BYV6 548 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 SPRY4Q9C004 299 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 TRIM7Q9C029 511 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 POLR1EQ9GZS1 481 aaKnown RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 EPB41L1Q9H4G0 881 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 ACTL8Q9H568 366 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 ETNK2Q9NVF9 386 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 HAUS2Q9NVX0 235 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PKD2L2Q9NZM6 624 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 PDP2Q9P2J9 529 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 TRIM10Q9UDY6 481 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 SIK3Q9Y2K2 1263 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 MED13Q9UHV7 2174 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 MN1Q10571 1320 aaPredicted RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 LILRA5A6NI73 299 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 OR5K4A6NMS3 321 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 FADS2P1A8MWK0 482 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 HAX1O00165 279 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 GRID2O43424 1007 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 KIF1CO43896 1103 aaKnown RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 MAFKO60675 156 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 SEMA7AO75326 666 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 LRCH4O75427 683 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 SPAG6O75602 509 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 SLC25A14O95258 325 aaPredicted RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 MT-ND3P03897 115 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 PDGFAP04085 211 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 ANKRD34CP0C6C1 535 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 RPL10P27635 214 aaKnown RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 COL8A1P27658 744 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 GARSP41250 739 aaKnown RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF135P52742 658 aaPredicted RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 STC1P52823 247 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CRTC2Q53ET0 693 aaPredicted RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 RALGPS1Q5JS13 557 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF569Q5MCW4 686 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CCDC122Q5T0U0 273 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CPZQ66K79 652 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF787Q6DD87 383 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 PPP1R2P3Q6NXS1 205 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CYB5D1Q6P9G0 228 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF765Q7L2R6 523 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 PPP1R3BQ86XI6 285 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 ARFGAP1Q8N6T3 406 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 SIDT2Q8NBJ9 832 aaKnown RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 GALNT11Q8NCW6 608 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CCHCR1Q8TD31 782 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CXorf40BQ96DE9 158 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 COX14Q96I36 57 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CSPG4P5Q96PW8 444 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 PLEKHG4BQ96PX9 1271 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms