RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CCDC187A0A096LP49 1063 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 GPR89AB7ZAQ6 455 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 DDX3YO15523 660 aaKnown RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 KCNN4O15554 427 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 GRID2O43424 1007 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 NUAK1O60285 661 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF189O75820 626 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 FTCDO95954 541 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 AGTP01019 485 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 GPR89BP0CG08 455 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 HLA-DPA1P20036 260 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ALDH4A1P30038 563 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 GPR3P46089 330 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 GEMP55040 296 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 INHBCP55103 352 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 GSDMDP57764 484 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 OR1D5P58170 312 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ZFP36L1Q07352 338 aaKnown RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 NR1D2Q14995 579 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ANKRD20A2Q5SQ80 823 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ANKRD20A1Q5TYW2 823 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ANKRD20A3Q5VUR7 823 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ZDHHC20Q5W0Z9 365 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 RANBP10Q6VN20 620 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ADGRG6Q86SQ4 1221 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 TTC30BQ8N4P2 665 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 TTC13Q8NBP0 860 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 GLYATL1Q969I3 302 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 LIN37Q96GY3 246 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 PRR11Q96HE9 360 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 HES6Q96HZ4 224 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 FSD1LQ9BXM9 530 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 FOXP3Q9BZS1 431 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 STRADBQ9C0K7 418 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 OR2AG1Q9H205 316 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 EPB41L5Q9HCM4 733 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ARFGAP3Q9NP61 516 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 IL26Q9NPH9 171 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ASCL3Q9NQ33 180 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 THSD1Q9NS62 852 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 IL17CQ9P0M4 197 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 RALYQ9UKM9 306 aaKnown RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 ATXN7L1Q9ULK2 861 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 PACSIN2Q9UNF0 486 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 AAR2Q9Y312 384 aaKnown RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 PCYT1BQ9Y5K3 369 aaPredicted RBP11.07□□□□□ -0.64
CKS1B-206ENST00000474215 APC2O95996 2303 aa11.07□□□□□ -0.64
CKS1B-206ENST00000474215 TRBV23OR9-2A0A075B6M9 112 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 PMS2P1A4D2B8 440 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 GOLGA6L9A6NEM1 432 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 CHUKO15111 745 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 PPM1DO15297 605 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 VEGFDO43915 354 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 TNFSF15O95150 251 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 CPNE6O95741 557 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 EML2O95834 649 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ACP5P13686 325 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF8P17098 575 aaPredicted RBP11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ITPKBP27987 946 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 CD1CP29017 333 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 CCKBRP32239 447 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 MLLT3P42568 568 aaPredicted RBP11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ABCG1P45844 678 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 PCBP4P57723 403 aaKnown RBP11.06□□□□□ -0.64
CKS1B-206ENST00000474215 EIF3IQ13347 325 aaKnown RBP11.06□□□□□ -0.64
CKS1B-206ENST00000474215 PRPSAP1Q14558 356 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 CLPPQ16740 277 aaPredicted RBP11.06□□□□□ -0.64
CKS1B-206ENST00000474215 AMZ1Q400G9 498 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ATP13A5Q4VNC0 1218 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF648Q5T619 568 aaPredicted RBP11.06□□□□□ -0.64
CKS1B-206ENST00000474215 IYDQ6PHW0 289 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 FOXR1Q6PIV2 292 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 USP53Q70EK8 1073 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 RAB11FIP2Q7L804 512 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 PIM3Q86V86 326 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 PHYKPLQ8IUZ5 450 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 SFRP1Q8N474 314 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 FBXO39Q8N4B4 442 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF248Q8NDW4 579 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 DTX3LQ8TDB6 740 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 BLOC1S5Q8TDH9 187 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 UBE2Q2Q8WVN8 375 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 SPATA13Q96N96 652 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 VPS35Q96QK1 796 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 GORASP1Q9BQQ3 440 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 FICDQ9BVA6 458 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.06□□□□□ -0.64
CKS1B-206ENST00000474215 TBC1D29Q9UFV1 150 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 TMPRSS11EQ9UL52 423 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 KCNK6Q9Y257 313 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
CKS1B-206ENST00000474215 ZFHX4Q86UP3 3567 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 URB1O60287 2271 aaKnown RBP11.05□□□□□ -0.64
CKS1B-206ENST00000474215 BPTFQ12830 3046 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 C5orf60A6NFR6 353 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 CDRT15L2A8MXV6 281 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 PLD2O14939 933 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 KMOO15229 486 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 BUD23O43709 281 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms