RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 CRELD1Q96HD1 420 aa17.76■□□□□ 0.43
UPF3A-203ENST00000474056 ZNF578Q96N58 590 aaPredicted RBP17.76■□□□□ 0.43
UPF3A-203ENST00000474056 SRPK1Q96SB4 655 aaKnown RBP17.76■□□□□ 0.43
UPF3A-203ENST00000474056 OR2AG1Q9H205 316 aa17.76■□□□□ 0.43
UPF3A-203ENST00000474056 CARD9Q9H257 536 aa17.76■□□□□ 0.43
UPF3A-203ENST00000474056 EPB41L5Q9HCM4 733 aa17.76■□□□□ 0.43
UPF3A-203ENST00000474056 KCNK6Q9Y257 313 aa17.76■□□□□ 0.43
UPF3A-203ENST00000474056 CCDC187A0A096LP49 1063 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 RHPN2P1A8MT19 583 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 GOLGA6L6A8MZA4 724 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 MIF4GDA9UHW6 222 aaKnown RBP17.75■□□□□ 0.43
UPF3A-203ENST00000474056 KCNN4O15554 427 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 B4GAT1O43505 415 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 TJP3O95049 919 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 EML2O95834 649 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ACP5P13686 325 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ZNF8P17098 575 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-203ENST00000474056 HLA-DPA1P20036 260 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 PSMB4P28070 264 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 HMGCLP35914 325 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 TNNT3P45378 269 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ABCG1P45844 678 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 GEMP55040 296 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 INHBCP55103 352 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 OR1D5P58170 312 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 OLIG2Q13516 323 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 PEX6Q13608 980 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 NR1D2Q14995 579 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ANKRD20A2Q5SQ80 823 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ANKRD20A1Q5TYW2 823 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ANKRD20A3Q5VUR7 823 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 PDPK2PQ6A1A2 396 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ITPRIPL1Q6GPH6 555 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 DARS2Q6PI48 645 aaKnown RBP17.75■□□□□ 0.43
UPF3A-203ENST00000474056 IGF2-ASQ6U949 168 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 UBL4BQ8N7F7 174 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 BLOC1S5Q8TDH9 187 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 FICDQ9BVA6 458 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 FSD1LQ9BXM9 530 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 RMI1Q9H9A7 625 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 PCDHGA8Q9Y5G5 932 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 ADGRG1Q9Y653 693 aa17.75■□□□□ 0.43
UPF3A-203ENST00000474056 TRBV23OR9-2A0A075B6M9 112 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 PPM1DO15297 605 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 GRID2O43424 1007 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 MTX2O75431 263 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 AGTP01019 485 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 ALDH4A1P30038 563 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 CCKBRP32239 447 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 CCDC173Q0VFZ6 552 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 AMZ1Q400G9 498 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 LRRC69Q6ZNQ3 347 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 GLT6D1Q7Z4J2 308 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 ADGRG6Q86SQ4 1221 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 PHYKPLQ8IUZ5 450 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 CCDC110Q8TBZ0 833 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 SLC37A2Q8TED4 501 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 NAF1Q96HR8 494 aaKnown RBP17.74■□□□□ 0.43
UPF3A-203ENST00000474056 TMEM74Q96NL1 305 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 SLC46A1Q96NT5 459 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 PLEKHG4BQ96PX9 1271 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 FERMT1Q9BQL6 677 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 TRABDQ9H4I3 376 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 IL17CQ9P0M4 197 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 TMPRSS11EQ9UL52 423 aa17.74■□□□□ 0.43
UPF3A-203ENST00000474056 AHCTF1Q8WYP5 2266 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 AGRPO00253 132 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 RRP8O43159 456 aaKnown RBP17.73■□□□□ 0.43
UPF3A-203ENST00000474056 BUD23O43709 281 aaKnown RBP17.73■□□□□ 0.43
UPF3A-203ENST00000474056 ANXA9O76027 345 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 RBMS1P29558 406 aaKnown RBP17.73■□□□□ 0.43
UPF3A-203ENST00000474056 PCBP4P57723 403 aaKnown RBP17.73■□□□□ 0.43
UPF3A-203ENST00000474056 GSDMDP57764 484 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 ERVPABLB-1P60509 514 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 ZFP36L1Q07352 338 aaKnown RBP17.73■□□□□ 0.43
UPF3A-203ENST00000474056 BIRC2Q13490 618 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 MAP9Q49MG5 647 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 ATP13A5Q4VNC0 1218 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 KHDC1Q4VXA5 237 aaKnown RBP17.73■□□□□ 0.43
UPF3A-203ENST00000474056 CRTC3Q6UUV7 619 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 SLITRK4Q8IW52 837 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 HES6Q96HZ4 224 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 RDH14Q9HBH5 336 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 TRIM39Q9HCM9 518 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 THSD1Q9NS62 852 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 HACD3Q9P035 362 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 TBC1D29Q9UFV1 150 aa17.73■□□□□ 0.43
UPF3A-203ENST00000474056 CACNA1GO43497 2377 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 GOLGA6L9A6NEM1 432 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 CDRT15L2A8MXV6 281 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 CHUKO15111 745 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 GPR39O43194 453 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 HGFP14210 728 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 ADRA1AP35348 466 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 SPAM1P38567 509 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 KLF1Q13351 362 aaPredicted RBP17.72■□□□□ 0.43
UPF3A-203ENST00000474056 PLA2G4EQ3MJ16 856 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 RAB11FIP2Q7L804 512 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 PDZD3Q86UT5 571 aa17.72■□□□□ 0.43
UPF3A-203ENST00000474056 ZNF761Q86XN6 746 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms