RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RAD18Q9NS91 495 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 NFKBIL1Q9UBC1 381 aaPredicted RBP15.14■□□□□ 0.01
VTI1A-203ENST00000472892 TBC1D29Q9UFV1 150 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 HYOU1Q9Y4L1 999 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 PCDHGA3Q9Y5H0 932 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 ADGRG1Q9Y653 693 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 GCN1Q92616 2671 aaKnown RBP15.14■□□□□ 0.01
VTI1A-203ENST00000472892 CFAP46Q8IYW2 2715 aa15.14■□□□□ 0.01
VTI1A-203ENST00000472892 AKR1B15C9JRZ8 316 aaPredicted RBP15.13■□□□□ 0.01
VTI1A-203ENST00000472892 GRID2O43424 1007 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 MPSTP25325 297 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 CDKN2BP42772 138 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 CLCNKAP51800 687 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 HADHBP55084 474 aaKnown RBP15.13■□□□□ 0.01
VTI1A-203ENST00000472892 DCDC1P59894 354 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 SRSF6Q13247 344 aaKnown RBP15.13■□□□□ 0.01
VTI1A-203ENST00000472892 LY6DQ14210 128 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 PRKD1Q15139 912 aaPredicted RBP15.13■□□□□ 0.01
VTI1A-203ENST00000472892 ODF2Q5BJF6 829 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 B4GALNT4Q76KP1 1039 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 ZNF605Q86T29 641 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 RNF214Q8ND24 703 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 AGBL5Q8NDL9 886 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 SPATA22Q8NHS9 363 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 TEKT5Q96M29 485 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 ZSCAN5AQ9BUG6 496 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 SPATA16Q9BXB7 569 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 SEMA4CQ9C0C4 833 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 TRIM39Q9HCM9 518 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 TMEM9Q9P0T7 183 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 ATXN10Q9UBB4 475 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 SHOC2Q9UQ13 582 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 KCNK6Q9Y257 313 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 PCDHB11Q9Y5F2 797 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 AHCTF1Q8WYP5 2266 aa15.13■□□□□ 0.01
VTI1A-203ENST00000472892 GPR89AB7ZAQ6 455 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 SPOPO43791 374 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 SLC25A14O95258 325 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 NDST3O95803 873 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 MT-CYBP00156 380 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 PIRTP0C851 137 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 GPR89BP0CG08 455 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 ACP5P13686 325 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 F3P13726 295 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 TNNT1P13805 278 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 ZNF8P17098 575 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 PTPN3P26045 913 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 ARSDP51689 593 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 DYNLT1P63172 113 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 HHEXQ03014 270 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 TFDP2Q14188 446 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 PCSK7Q16549 785 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 PDPK2PQ6A1A2 396 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 WDR74Q6RFH5 385 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 ZNF761Q86XN6 746 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 TRAM1L1Q8N609 369 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 OR10G6Q8NH81 332 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 SH3KBP1Q96B97 665 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 SGF29Q96ES7 293 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 MED8Q96G25 268 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 AHCYL2Q96HN2 611 aaKnown RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 SRPK1Q96SB4 655 aaKnown RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 HERPUD2Q9BSE4 406 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 ANP32EQ9BTT0 268 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 WDR70Q9NW82 654 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 SAE1Q9UBE0 346 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-203ENST00000472892 ZNF711Q9Y462 761 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 ALG6Q9Y672 507 aa15.12■□□□□ 0.01
VTI1A-203ENST00000472892 A0A0A6YYK5 440 aaPredicted RBP15.11■□□□□ 0.01
VTI1A-203ENST00000472892 KIR2DS5A0A0G2JLQ3 304 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 A0A0G2JNG1 304 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 OR5K4A6NMS3 321 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 B4E171 279 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 KIR2DS3K7RE56 304 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 CHUKO15111 745 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 PSTPIP1O43586 416 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 CST8O60676 142 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 LCA5LO95447 670 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 SLC2A4P14672 509 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 CSTF2P33240 577 aaKnown RBP eCLIP15.11■□□□□ 0.01
VTI1A-203ENST00000472892 CD68P34810 354 aaPredicted RBP15.11■□□□□ 0.01
VTI1A-203ENST00000472892 TSPAN7P41732 249 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 MAGEA1P43355 309 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 NOP2P46087 812 aaKnown RBP15.11■□□□□ 0.01
VTI1A-203ENST00000472892 ADCY2Q08462 1091 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 WASHC5Q12768 1159 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 KIR2DS5Q14953 304 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 ZNF569Q5MCW4 686 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 MANEAQ5SRI9 462 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 ZNF648Q5T619 568 aaPredicted RBP15.11■□□□□ 0.01
VTI1A-203ENST00000472892 ALS2CLQ60I27 953 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 CCDC70Q6NSX1 233 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 SPOCD1Q6ZMY3 1216 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 ADGRG6Q86SQ4 1221 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 SLC9B2Q86UD5 537 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 TFB1MQ8WVM0 346 aaKnown RBP15.11■□□□□ 0.01
VTI1A-203ENST00000472892 GLYATL1Q969I3 302 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 DDA1Q9BW61 102 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 GPR63Q9BZJ6 419 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 OR2AG1Q9H205 316 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms