RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 ZNF578Q96N58 590 aaPredicted RBP16.88■□□□□ 0.29
COMMD3-210ENST00000472610 TMEM74Q96NL1 305 aa16.88■□□□□ 0.29
COMMD3-210ENST00000472610 FAM118BQ9BPY3 351 aa16.88■□□□□ 0.29
COMMD3-210ENST00000472610 BPIFA1Q9NP55 256 aa16.88■□□□□ 0.29
COMMD3-210ENST00000472610 IL17CQ9P0M4 197 aa16.88■□□□□ 0.29
COMMD3-210ENST00000472610 ATXN10Q9UBB4 475 aa16.88■□□□□ 0.29
COMMD3-210ENST00000472610 PKP3Q9Y446 797 aa16.88■□□□□ 0.29
COMMD3-210ENST00000472610 A0A087WV48 116 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 D6RAR5 112 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 GRID2O43424 1007 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 VEGFDO43915 354 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 AGTP01019 485 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 MPOP05164 745 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 CCDC175P0C221 793 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 SLC2A4P14672 509 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 PSMB4P28070 264 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 GPR3P46089 330 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 MAZP56270 477 aaKnown RBP16.87■□□□□ 0.29
COMMD3-210ENST00000472610 NR1D2Q14995 579 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 CLPPQ16740 277 aaPredicted RBP16.87■□□□□ 0.29
COMMD3-210ENST00000472610 TBC1D25Q3MII6 688 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 SEL1L2Q5TEA6 688 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 IGF2-ASQ6U949 168 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 ZNF438Q7Z4V0 828 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 LRRC8AQ8IWT6 810 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 WDR36Q8NI36 951 aaKnown RBP16.87■□□□□ 0.29
COMMD3-210ENST00000472610 SNIP1Q8TAD8 396 aaKnown RBP16.87■□□□□ 0.29
COMMD3-210ENST00000472610 CCDC110Q8TBZ0 833 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 LIN37Q96GY3 246 aaPredicted RBP16.87■□□□□ 0.29
COMMD3-210ENST00000472610 FICDQ9BVA6 458 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 STRADBQ9C0K7 418 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 OR2AG1Q9H205 316 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 PCDHGA8Q9Y5G5 932 aa16.87■□□□□ 0.29
COMMD3-210ENST00000472610 CCDC187A0A096LP49 1063 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 C2orf81A6NN90 581 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 CHUKO15111 745 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 RRP8O43159 456 aaKnown RBP16.86■□□□□ 0.29
COMMD3-210ENST00000472610 ZNF8P17098 575 aaPredicted RBP16.86■□□□□ 0.29
COMMD3-210ENST00000472610 RBMS1P29558 406 aaKnown RBP16.86■□□□□ 0.29
COMMD3-210ENST00000472610 CCKBRP32239 447 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 ADRA1AP35348 466 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 SPAM1P38567 509 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 MLLT3P42568 568 aaPredicted RBP16.86■□□□□ 0.29
COMMD3-210ENST00000472610 CLCNKAP51800 687 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 INHBCP55103 352 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 ERVPABLB-1P60509 514 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 B4GALNT1Q00973 533 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 EIF3IQ13347 325 aaKnown RBP16.86■□□□□ 0.29
COMMD3-210ENST00000472610 PARP6Q2NL67 630 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 C3orf38Q5JPI3 329 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 LRRC69Q6ZNQ3 347 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 ADGRG6Q86SQ4 1221 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 SLC35B2Q8TB61 432 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 BRSK1Q8TDC3 778 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 GORASP1Q9BQQ3 440 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 FRMD8P1Q9BZ68 369 aaPredicted RBP16.86■□□□□ 0.29
COMMD3-210ENST00000472610 IL26Q9NPH9 171 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 FEZ2Q9UHY8 353 aaPredicted RBP16.86■□□□□ 0.29
COMMD3-210ENST00000472610 SATB2Q9UPW6 733 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 PRKAB1Q9Y478 270 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 UNC13CQ8NB66 2214 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 ACACAQ13085 2346 aa16.86■□□□□ 0.29
COMMD3-210ENST00000472610 OR5K4A6NMS3 321 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 KMOO15229 486 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 CASC3O15234 703 aaKnown RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 STX7O15400 261 aaKnown RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 B4GAT1O43505 415 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 TLX3O43711 291 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ACP5P13686 325 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ALDH4A1P30038 563 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 STIP1P31948 543 aaKnown RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 EIF2S3P41091 472 aaKnown RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 FASLGP48023 281 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 PDX1P52945 283 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 PDE1BQ01064 536 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ITGA9Q13797 1035 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 TAF1AQ15573 450 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ATP13A5Q4VNC0 1218 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ARHGEF18Q6ZSZ5 1173 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 KLHDC8BQ8IXV7 354 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 PATE1Q8WXA2 126 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ALS2CR12Q96Q35 445 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ARNT2Q9HBZ2 717 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ARFGAP3Q9NP61 516 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 THSD1Q9NS62 852 aa16.85■□□□□ 0.29
COMMD3-210ENST00000472610 PCYT1BQ9Y5K3 369 aaPredicted RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 URB1O60287 2271 aaKnown RBP16.85■□□□□ 0.29
COMMD3-210ENST00000472610 ASPMQ8IZT6 3477 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 GLYATL1P3A0A0U1RQE8 302 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 PPM1DO15297 605 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 PSMD3O43242 534 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 CDK14O94921 469 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 CRTAMO95727 393 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 CPNE6O95741 557 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 LPOP22079 712 aaPredicted RBP16.84■□□□□ 0.29
COMMD3-210ENST00000472610 GTF2H3Q13889 308 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 RPS6KA1Q15418 735 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 P3H1Q32P28 736 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 LDLRAP1Q5SW96 308 aa16.84■□□□□ 0.29
COMMD3-210ENST00000472610 ZNF648Q5T619 568 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms