RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 FREM2Q5SZK8 3169 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 C5orf60A6NFR6 353 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 DNAJC6O75061 913 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 ASMTLO95671 621 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 MT-CO3P00414 261 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 AGTP01019 485 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 CTBSQ01459 385 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 TARDBPQ13148 414 aaKnown RBP eCLIP14.93□□□□□ -0.02
CALD1-215ENST00000472096 OLIG2Q13516 323 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 PDPK2PQ6A1A2 396 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 OGFOD3Q6PK18 319 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 SLC30A9Q6PML9 568 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 ARHGEF18Q6ZSZ5 1173 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 GALNT13Q8IUC8 556 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 SFTPA2Q8IWL1 248 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 KLHDC8BQ8IXV7 354 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 TRIM58Q8NG06 486 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 RNF166Q96A37 237 aaPredicted RBP14.93□□□□□ -0.02
CALD1-215ENST00000472096 CCDC74AQ96AQ1 378 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 CCDC3Q9BQI4 270 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 TMEM121Q9BTD3 319 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 DPEP2Q9H4A9 486 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 BPIFA1Q9NP55 256 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 TAAR2Q9P1P5 351 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 PLEKHM1Q9Y4G2 1056 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 GPSM3Q9Y4H4 160 aa14.93□□□□□ -0.02
CALD1-215ENST00000472096 PCYT1BQ9Y5K3 369 aaPredicted RBP14.93□□□□□ -0.02
CALD1-215ENST00000472096 APC2O95996 2303 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 CAPNS1P04632 268 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 LRP8Q14114 963 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 HLTFQ14527 1009 aaKnown RBP eCLIP14.92□□□□□ -0.02
CALD1-215ENST00000472096 OASLQ15646 514 aaKnown RBP14.92□□□□□ -0.02
CALD1-215ENST00000472096 C14orf28Q4W4Y0 310 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 CERCAMQ5T4B2 595 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 RANBP10Q6VN20 620 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 PHYKPLQ8IUZ5 450 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 OR6C4Q8NGE1 309 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 ZDHHC1Q8WTX9 485 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 GLYATL1Q969I3 302 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 NXPE2Q96DL1 559 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 RTP4Q96DX8 246 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 DEPDC7Q96QD5 511 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 TBL1YQ9BQ87 522 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 APOL2Q9BQE5 337 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 FRMD8P1Q9BZ68 369 aaPredicted RBP14.92□□□□□ -0.02
CALD1-215ENST00000472096 ABCG4Q9H172 646 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 ARFGAP3Q9NP61 516 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 SPATS2LQ9NUQ6 558 aaKnown RBP14.92□□□□□ -0.02
CALD1-215ENST00000472096 IL17CQ9P0M4 197 aa14.92□□□□□ -0.02
CALD1-215ENST00000472096 KMT2BQ9UMN6 2715 aaPredicted RBP14.92□□□□□ -0.02
CALD1-215ENST00000472096 TRABD2BA6NFA1 517 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 CFAP99D6REC4 459 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 CASC3O15234 703 aaKnown RBP14.91□□□□□ -0.02
CALD1-215ENST00000472096 LIASO43766 372 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 SPAM1P38567 509 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 ACTR1BP42025 376 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 ACTR1AP61163 376 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 P3H1Q32P28 736 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 ZDHHC20Q5W0Z9 365 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 BRICD5Q6PL45 260 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 WDR48Q8TAF3 677 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 MDM1Q8TC05 714 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 VPS35Q96QK1 796 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 TLR10Q9BXR5 811 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 CCDC86Q9H6F5 360 aaKnown RBP14.91□□□□□ -0.02
CALD1-215ENST00000472096 RMI1Q9H9A7 625 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 ATXN10Q9UBB4 475 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 DKK4Q9UBT3 224 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 ZMIZ1Q9ULJ6 1067 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 PRKAB1Q9Y478 270 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 BPTFQ12830 3046 aa14.91□□□□□ -0.02
CALD1-215ENST00000472096 GPR89AB7ZAQ6 455 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 BUD23O43709 281 aaKnown RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 NUAK1O60285 661 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 USP12O75317 370 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 CSO75390 466 aaKnown RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 TCEA3O75764 348 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 SLC25A14O95258 325 aaPredicted RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 METTL18O95568 372 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 GPR89BP0CG08 455 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 GLB1P16278 677 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 MAZP56270 477 aaKnown RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 PEX6Q13608 980 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 SIX1Q15475 284 aaPredicted RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 TAF1AQ15573 450 aaPredicted RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 PARP6Q2NL67 630 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 ZNF648Q5T619 568 aaPredicted RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 KCTD11Q693B1 232 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 C17orf82Q86X59 251 aaPredicted RBP14.9□□□□□ -0.02
CALD1-215ENST00000472096 PROSER1Q86XN7 944 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 NAGSQ8N159 534 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 DTX3LQ8TDB6 740 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 LRRC45Q96CN5 670 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 NRSN2Q9GZP1 204 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 OR2AG1Q9H205 316 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 SYNDIG1Q9H7V2 258 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 TRIM39Q9HCM9 518 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 IL26Q9NPH9 171 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 ZNHIT2Q9UHR6 403 aa14.9□□□□□ -0.02
CALD1-215ENST00000472096 TMPRSS11EQ9UL52 423 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms