RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ACP5P13686 325 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 TYRP1P17643 537 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 CTPS1P17812 591 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 ERCC2P18074 760 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 LEPRP48357 1165 aaKnown RBP18.77■□□□□ 0.6
SORT1-203ENST00000471996 RPS18P62269 152 aaKnown RBP18.77■□□□□ 0.6
SORT1-203ENST00000471996 RPL7AP62424 266 aaKnown RBP18.77■□□□□ 0.6
SORT1-203ENST00000471996 PTSQ03393 145 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 ZNF235Q14590 738 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 SYVN1Q86TM6 617 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 PHF13Q86YI8 300 aaPredicted RBP18.77■□□□□ 0.6
SORT1-203ENST00000471996 PGBD5Q8N414 524 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 PIH1D2Q8WWB5 315 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 PNPLA2Q96AD5 504 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 MCEEQ96PE7 176 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 TUBGCP2Q9BSJ2 902 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 MFRPQ9BY79 579 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 AP4E1Q9UPM8 1137 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 SLC30A1Q9Y6M5 507 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 C2CD3Q4AC94 2353 aa18.77■□□□□ 0.6
SORT1-203ENST00000471996 EIF3CLB5ME19 914 aaKnown RBP18.76■□□□□ 0.59
SORT1-203ENST00000471996 DAPK3O43293 454 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 RASSF9O75901 435 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 TIAF1O95411 115 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 AMD1P17707 334 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 LAMB3Q13751 1172 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 NR6A1Q15406 480 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 CA9Q16790 459 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 TPD52L1Q16890 204 aaPredicted RBP18.76■□□□□ 0.59
SORT1-203ENST00000471996 ARMC12Q5T9G4 340 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 SLC6A19Q695T7 634 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 CYB5D1Q6P9G0 228 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 TMEM26Q6ZUK4 368 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 RFX8Q6ZV50 586 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 PRSS42Q7Z5A4 293 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 HPS6Q86YV9 775 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 TP53INP2Q8IXH6 220 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 KLHL6Q8WZ60 621 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 MOCOSQ96EN8 888 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 C19orf60Q96EN9 201 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 PLEKHG4BQ96PX9 1271 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 EIF3CQ99613 913 aaKnown RBP18.76■□□□□ 0.59
SORT1-203ENST00000471996 MGME1Q9BQP7 344 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 RIOK2Q9BVS4 552 aaKnown RBP18.76■□□□□ 0.59
SORT1-203ENST00000471996 DHX35Q9H5Z1 703 aaKnown RBP18.76■□□□□ 0.59
SORT1-203ENST00000471996 RMI1Q9H9A7 625 aa18.76■□□□□ 0.59
SORT1-203ENST00000471996 AKIRIN1Q9H9L7 192 aaPredicted RBP18.76■□□□□ 0.59
SORT1-203ENST00000471996 CNOT6Q9ULM6 557 aaKnown RBP18.76■□□□□ 0.59
SORT1-203ENST00000471996 PEX11BO96011 259 aa18.75■□□□□ 0.59
SORT1-203ENST00000471996 IL10RAQ13651 578 aa18.75■□□□□ 0.59
SORT1-203ENST00000471996 ZRANB3Q5FWF4 1079 aa18.75■□□□□ 0.59
SORT1-203ENST00000471996 RALGPS1Q5JS13 557 aa18.75■□□□□ 0.59
SORT1-203ENST00000471996 DNAJC24Q6P3W2 148 aa18.75■□□□□ 0.59
SORT1-203ENST00000471996 FAM199XQ6PEV8 388 aaPredicted RBP18.75■□□□□ 0.59
SORT1-203ENST00000471996 RBMXL3Q8N7X1 1067 aaKnown RBP18.75■□□□□ 0.59
SORT1-203ENST00000471996 OTOGQ6ZRI0 2925 aa18.75■□□□□ 0.59
SORT1-203ENST00000471996 KRT86O43790 486 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 KIF1CO43896 1103 aaKnown RBP18.74■□□□□ 0.59
SORT1-203ENST00000471996 ZNF30P17039 623 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 XRCC1P18887 633 aaPredicted RBP18.74■□□□□ 0.59
SORT1-203ENST00000471996 LPOP22079 712 aaPredicted RBP18.74■□□□□ 0.59
SORT1-203ENST00000471996 CLCNKAP51800 687 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 STC1P52823 247 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 RPS15P62841 145 aaKnown RBP18.74■□□□□ 0.59
SORT1-203ENST00000471996 CLEC16AQ2KHT3 1053 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 PPP1R15BQ5SWA1 713 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 CACHD1Q5VU97 1274 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 PWWP2BQ6NUJ5 590 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 MON1BQ7L1V2 547 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 PHYKPLQ8IUZ5 450 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 RHOT1Q8IXI2 618 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 NDUFAF2Q8N183 169 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 FDCSPQ8NFU4 85 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 SNRNP40Q96DI7 357 aaKnown RBP18.74■□□□□ 0.59
SORT1-203ENST00000471996 FCRL4Q96PJ5 515 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 SMIM14Q96QK8 99 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 PDE7BQ9NP56 450 aa18.74■□□□□ 0.59
SORT1-203ENST00000471996 PES1O00541 588 aaKnown RBP18.73■□□□□ 0.59
SORT1-203ENST00000471996 HNRNPRO43390 633 aaKnown RBP18.73■□□□□ 0.59
SORT1-203ENST00000471996 VIPP01282 170 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 PDHA1P08559 390 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 DESP17661 470 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 NELFEP18615 380 aaKnown RBP18.73■□□□□ 0.59
SORT1-203ENST00000471996 SOX5P35711 763 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 PTGIRP43119 386 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 MAXP61244 160 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 OGDHQ02218 1023 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 ERMARDQ5T6L9 678 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 KCTD15Q96SI1 283 aaPredicted RBP18.73■□□□□ 0.59
SORT1-203ENST00000471996 NUDT9Q9BW91 350 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 GANQ9H2C0 597 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 SCHIP1Q9P0W5 487 aaPredicted RBP18.73■□□□□ 0.59
SORT1-203ENST00000471996 RARRES3Q9UL19 164 aa18.73■□□□□ 0.59
SORT1-203ENST00000471996 FARSAQ9Y285 508 aaKnown RBP18.73■□□□□ 0.59
SORT1-203ENST00000471996 PRRC2CQ9Y520 2896 aaKnown RBP18.73■□□□□ 0.59
SORT1-203ENST00000471996 GRID2O43424 1007 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 FZD6O60353 706 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 PRF1P14222 555 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 GRNP28799 593 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms